Salvia hispanica (chia): 125222593
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Entry
125222593 CDS
T09851
Name
(RefSeq) probable E3 ubiquitin-protein ligase ARI8
KO
K11968
ariadne-1 [EC:
2.3.2.31
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125222593
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
125222593
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
125222593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
IBR_2
UBA_ARI1
Ariadne
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_2
Zn_ribbon_RanBP
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
125222593
NCBI-ProteinID:
XP_047981254
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Position
4:22546473..22553638
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AA seq
599 aa
AA seq
DB search
MESEDDMHDANEVASVEEDDNYYSGGEEDHDMDEDYGYDYADEEDDDDAADYDFIANSDD
GDDALVSRSQKNYTILKEEDIQRRQFEDITKISTVLSIPREAACILLRRYNWSVNNVHEE
WFADEENVRRAVGILEKPVVKSPSYKEVSCGICFESYSIGKLQTLACSHLFCDTCWKAYI
STSINDGPGCLVLRCPDPSCGAAVGQDMIDKLGSHEDKEKYRRYLLRSYVEDSRKIKWCP
APGCDSAVEYVVGSGNYDVTCSCSYSFCWNCAEEAHRPVDCETVAKWVLKNSAESENMNW
ILANSKPCPKCKRPIEKNQGCMHMTCTPPCKFEFCWLCLGQWSDHGERTGGFYACNRYEA
AKQEGVYDESERRREMAKNSLERYTHYYERWASNQSSRQKAMADLHQMQSVHLEKLSEVQ
CQPESQLKFIIEAWQQIVECRKVLKWTYAYGFYLPEAEHTKKQFFEYLQGEAEAGLERLH
QCAEKELMNYLNSEGPSKDFNDFRTKLAGLTSVTRNYFENLVRALENGLSDVDSQAVCNK
MSSKTAAGTSKSKGGRGKGSSKTGTSVRNADDLGSWACDKCTYMNARSAVACHVCNHRR
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgaggacgatatgcacgatgccaatgaagtggcgtcggtggaggaggacgac
aactactacagcggcggggaggaggaccacgacatggacgaggactacggctacgactac
gccgatgaagaggacgacgacgatgctgctgattacgacttcatcgccaactcggatgac
ggcgatgacgcactcgtcagtcggtcgcagaagaactatactatcttaaaagaagaagat
atacaacgacgccaattcgaagatattaccaaaatatcaactgttctttctattccacgg
gaagcagcatgcatactattgaggcgctataactggagtgtgaataacgtgcatgaagaa
tggtttgctgatgaagaaaatgttcgcagagctgttggcatattggagaaaccagtcgtg
aagtctccaagttacaaagaagtgtcttgcgggatctgtttcgagagctactctattgga
aaactacaaactcttgcatgctctcaccttttttgtgacacgtgctggaaagcttacata
agcacttccatcaatgatggtcctggatgcttggtgctgaggtgtcctgatccatcctgt
ggtgctgctgttggccaagatatgattgataagttaggttcccatgaggataaagagaag
taccgccgctatcttcttagatcttatgttgaggacagccgtaagattaagtggtgccct
gctcctggttgcgattcagccgtggaatatgttgttggtagtggaaactatgatgtcact
tgcagttgttcatatagcttctgttggaattgtgcagaagaagctcatcggccagtagac
tgtgaaaccgtggctaagtgggttttgaaaaacagtgcagaatccgagaacatgaactgg
attttggccaactccaagccctgtcccaagtgcaagcggccgattgaaaagaaccaaggc
tgcatgcacatgacttgcactccaccatgcaagtttgagttttgctggttgtgtcttggt
caatggtcggaccatggtgagagaactggaggtttctatgcatgcaaccgttatgaagca
gcaaaacaagagggagtgtatgatgaatcggaaaggaggagggagatggccaagaactcc
ttggaaagatacactcattattatgagcgatgggcatccaaccaatcgtcaaggcaaaaa
gcaatggcggatctgcatcaaatgcaaagtgtacatcttgagaagcttagtgaagttcaa
tgccagcctgagtcacaattgaagttcataattgaagcttggcaacagatagttgaatgc
agaaaggttcttaaatggacttatgcatatggattctatctacctgaggcagaacataca
aaaaaacagttctttgagtatttgcaaggtgaggcggaagctggtctggagaggcttcat
cagtgtgcagagaaagagctaatgaattacctgaattctgaggggccatcaaaagatttt
aatgacttccgcaccaaacttgctggcctgacaagcgtgactcggaactactttgaaaac
ctggttagagcactggagaatgggctttcagacgtagattcacaggcagtgtgcaacaag
atgagctcaaaaaccgcagcagggactagcaagagcaaaggcggaagagggaaaggatct
tccaagacgggcacatcagtcagaaacgcagatgatttaggaagttgggcatgtgacaag
tgtacgtatatgaatgctcgatccgcagttgcatgccatgtgtgtaaccaccgtcgttga
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