Salvia hispanica (chia): 125222738
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Entry
125222738 CDS
T09851
Name
(RefSeq) F-box/LRR-repeat protein 4
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125222738
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125222738
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_At5g56370
F-box_5
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
125222738
NCBI-ProteinID:
XP_047981471
LinkDB
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Position
4:complement(54769601..54775196)
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AA seq
604 aa
AA seq
DB search
MKGFDLVNGVLPDELIVEIFRRLDAKPSRDACSLVCKRWLSLERLSRDTIHIGASASPDK
LVELLGRLFPNIQYVFVDERISVTLPVQCGKRRRRSLTRGRWDEGSDQNAFGDDSMGASC
LSNYGLEAVGGSFVKLEKLSLIWCSSLTDAGLKSFAEKCRSLKSLDLQGCYIGDEGLAAI
GECCNSLQDLNLRFCEGLTDRGLVQLALGCGKTLKSIGVAACAKITDISLEAVGSHCRCL
ESLSLDSEIINDKGLLAVAKRCSTLKVLKLQCLNITDEALQAVGIYCSSLVVLALYSFQK
LTDRSLFAIGRGCKKLTNLTLSDCFLLSNIGLDSIAVGCSELMHIEINGCHNIGTDGFKS
VGKFCARLSELALLYCQRIESGALSEIGKGCKFLQALHLVDCSGIGDDSMCSIAMGCSNL
KKLHIRRCYEVGNKGIVAIGENCKSLTDLTLRFCDRIGDEALISIGQGCSLHQLNVSGCH
QIGDAGIIAIARGSPELNSLDISVLQNLGDNAMMELSEGCPLLKNIVISHCRQITDMGVG
YLSRRCTLLESCHMVYCPRVTEAGVATMVAMCTRMKKILVEKWKVSSRTKRRAGSIISYL
CVDL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggtttgatctggtgaacggcgttctgccggacgaattgatagtggagatattc
cggcgcctggatgcgaagccgagccgcgacgcctgctcgctggtctgcaagcggtggctc
agcctcgagcgcctcagccgcgacacaattcacatcggcgcctccgcctcccccgacaag
ctcgtcgagctgctcggccgcctcttcccgaatatacaatacgtgttcgtcgacgagcgc
atctccgtcacgctacccgtgcaatgcggaaaaagacgtcgccgttcacttacgaggggc
aggtgggatgagggatctgaccaaaatgcgtttggcgatgatagcatgggagctagttgt
ttatcaaactatgggctggaagctgttgggggaagctttgtaaagcttgaaaaattgagc
cttatatggtgctctagcttaacagacgcagggttaaaatcttttgccgaaaaatgtcga
tcacttaaatctctcgatttacagggctgctacattggagatgaaggtttagctgctata
ggagaatgctgcaattctcttcaggatttgaacttacgattttgtgaaggattgactgat
agaggactggttcaactggcccttggttgtgggaagaccttgaaatcaattggggttgct
gcatgtgctaagatcactgatatctcactagaggcagtgggatctcactgtagatgtctt
gaatctctatcactggactcagagatcatcaatgacaaaggcttgcttgctgtggcaaaa
agatgttccacactaaaagttctgaaactgcaatgtctgaatattactgatgaagctcta
caagctgttggaatatattgttcatcgttggtggtattggctctatacagcttccagaaa
ttgacagacaggagcctgtttgccattgggaggggatgtaagaagttgacaaatcttaca
ttgagtgactgtttccttctgagtaacattggtttagactctatagctgtcggttgctca
gagcttatgcatattgaaattaatggctgccacaatattggaactgatggattcaagtct
gttggaaaattttgtgcccgactttctgagctagccttgctgtactgtcagaggatagaa
agtggtgccctaagcgaaattggtaaaggatgcaaattcttgcaagctcttcacttggta
gattgctcagggattggggatgattccatgtgtagtatagccatgggctgtagtaactta
aagaaactccatattcgccgatgttatgaggtgggaaataaaggaatagttgccattgga
gaaaactgtaaatctctcactgacctcacgcttcgattctgtgacaggattggggatgaa
gcactgatttcaataggtcaaggctgctccttacatcaattgaatgtaagtggttgccac
caaattggggatgctggaataattgctattgctagaggcagccctgaactcaattctctg
gatataagcgttcttcagaatcttggggataatgcgatgatggagttgagcgaaggttgt
cctttactaaagaacatcgtgatatcacattgtcgccagataacagacatgggggttggc
tatctttcaagaagatgcacgttactggagtcgtgccacatggtgtactgccccagggtc
actgaagctggagttgcgaccatggttgcaatgtgtacgagaatgaagaagatactggtc
gagaagtggaaggttagttctcggaccaaaagacgagctggatccatcatcagttacctg
tgtgtcgacctttaa
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