Salvia hispanica (chia): 125222756
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Entry
125222756 CDS
T09851
Name
(RefSeq) uncharacterized protein LOC125222756 isoform X1
KO
K13144
integrator complex subunit 7
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125222756
Spliceosome [BR:
shis03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
125222756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS7_C_plants
INTS7_N
INTS7_HB
Motif
Other DBs
NCBI-GeneID:
125222756
NCBI-ProteinID:
XP_047981500
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Position
4:complement(4898703..4904331)
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AA seq
1154 aa
AA seq
DB search
MERTPAACAMDWSIQLQKDLRSDIPGKPIAALEEIGRRLQRWNKEPKLTIAEHTMFGLIP
EEDKLFLNAILLCLADAFSSGDKQTKKCVVRIFMKIKKGNRGAEGIFSNEMFENQLELVR
RVKEVFDEGDTEERALSLRLFGCWAYLAKGCPDVRYVVLSSLVSGDVLEVKAAYFAAGCL
SEMSDDFAIVFLEMLRSTVSSQESSEDIKLAAGRAFAKLWCSFSIAENAYKLGLKLLMDS
LEDDFSATMLISLSKIASRWMLLIPTQIELLTLFQSEDRSLRMQVTSLRCFRFLLAREVC
MFPSNTSTVHRVFGILHRSELQPTLQLESLRLLYKILLINLPIIPCMEIPELFQKLFVVV
KNMLKSSVQSNRVFAVNVLAVLSGKVLGRQDTWSGGSGCTLASQVISFILDQVISLVTPF
GNSMADFAVEFEVKSLLKTLFNLIENCPKLHCLVLNSACLFVCNLMKMIDRERGSEKTVL
SNPHMTVYVSNGKTLVVSNIILTMSKIMAFCLENLEYTNTETSHTLDLDALKLQVEIVCH
CSYIGSYTRLMNFLLLHLHSAFICMKNLTEDLLSPCKSSSLSCASSILEFDKSTLCCANE
ILEGNNYWYAYKAGKNAACQGAWSTAAFIFEELMKAVKSPSCCSWLKSLSWFSTSEKTIQ
LFFLSGQGTCIIPGGSGLREMGVSALSTGSYKYREILLNGRDEILSAEEILSAEEILRAP
DMGHIFSFQRWFLTLRAKVLKKVADMMQLLDSVSFILGGTGCGVLHRGTLLSPTTSLKLG
SFINSIMEASCYMKKLAEEYDMLLTSFMGMDRQSVMSVSTLALNCSVMAFTAGFAFLVPD
WCSSEIYKVSESRYLDETLHALLIEDLLGRFKHIGRKTRENLLFLLKPFRNCNRCSSSRF
ITQTCSYETVILHKLCEYSVREIFNLFSEAARRERDADALHQIISRGTEVLRNVISNLML
VPFHTPHHFFKVRSAVSSELFVMNEDGQVLDGSSILLGSSLSLNLSFQMKNMTTGLPSPS
NKVYCILGCKPHSLVTTSIGDFKWQSQLRKEEDEMDNTMELNKKLFRYVTGSVETEGHCR
RRDNDRFMVTEYVRFELNERGQGFSTCFLDISILPVGAYEIISHSGYVDSEGSYRSLLSV
NAGPSIIVKVVKTV
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaaccccagcagcttgtgctatggactggagcattcagctccaaaaagacctt
cgttcagatataccaggtaaacctattgctgccctagaagaaatcggcaggcgacttcag
cggtggaacaaggagccaaaactgacgattgcagagcacacgatgttcggcttaatcccg
gaggaggataagctgttcctcaatgcaattttactgtgtctggccgatgcgtttagttca
ggggacaaacaaactaaaaaatgtgtagttagaatttttatgaaaattaagaagggaaat
agaggtgctgagggtatttttagcaatgaaatgtttgagaatcaattggagttggtgagg
agagtgaaggaagtgtttgatgaaggggatactgaggaaagagcactctctttgcggctg
tttggttgctgggcttatttagcaaagggttgtccggatgtgcggtatgttgtgctgtca
agtttggttagtggtgatgttcttgaggtgaaggctgcttattttgctgcaggttgcttg
tctgagatgtcagatgactttgcaattgttttcttggagatgcttaggtcaacagtctcg
tcacaggagagttcagaagacataaagttagctgcaggacgtgcattcgccaaactgtgg
tgctcgttttcaattgcagagaatgcgtacaagttaggtttgaagcttctcatggattct
ttggaagatgacttctcagctaccatgctaatttcactttccaaaattgcttctcggtgg
atgcttctaattcctacccagatagaattgcttacactgtttcaaagtgaagatagatct
ttgcgcatgcaagtgacatctttgagatgcttccgctttttattagcaagagaagtttgt
atgtttccttcaaatacaagcacagtccatagggtattcggcatcctacacagatctgaa
cttcaaccgacactgcagcttgaatctctaagacttttatataagatccttctgatcaat
ttacccattattccgtgcatggagattccggagcttttccagaagctgtttgtagttgtt
aaaaatatgctaaaatcatctgtgcaatcaaacagagtttttgctgttaatgttctagca
gttctttcgggaaaagttttgggaagacaagatacgtggtcaggtggatcaggttgtact
ttggcatcccaggtgatctctttcatcctagatcaagtcatatccctcgtgacaccattt
ggtaatagtatggctgactttgctgtggagtttgaggttaaaagcttgctgaaaacttta
ttcaacttgattgagaattgcccaaagcttcattgcctagtactcaatagtgcatgttta
tttgtatgtaatttgatgaagatgatcgacagagaaagaggatcagagaaaacagtcttg
tcaaatccccatatgacagtgtatgtgagcaatggcaaaacactggttgtatcaaatatc
attctcactatgtcaaaaatcatggctttttgtttggaaaaccttgaatacacaaatact
gaaaccagccacaccttggatttggatgcattgaaacttcaagtagaaattgtatgccat
tgtagctatataggtagctacactaggctgatgaactttctattattgcacttacattct
gcctttatctgcatgaagaatttgacagaggacttgttgtcaccttgtaagagttctagt
ttgtcctgtgcttcttccattcttgagtttgataaatctaccttgtgttgtgcaaatgag
attttagaaggaaataattactggtatgcttataaggctggaaaaaatgctgcctgtcag
ggtgcatggtccacagctgctttcatatttgaggagcttatgaaagcagttaaatctcct
tcctgttgcagttggttaaaatctctgtcttggttctctacctcagaaaaaacgattcag
ctgttctttttatctggccaaggcacatgtatcatcccaggtggtagtggtttacgtgaa
atgggtgtcagtgcattgagtaccggaagttacaagtatagggaaattcttcttaatggc
cgtgatgaaattctttctgctgaagaaattctttctgctgaagaaattcttcgagcccct
gatatgggccatatattcagtttccaaagatggtttttgacccttagagcaaaggttttg
aaaaaagttgctgatatgatgcagctacttgattctgtttcatttatcctgggtggcact
gggtgtggagtgttacatagaggtactcttctttcgcccacaacttctttgaaacttggc
tccttcattaactctattatggaggcatcatgctacatgaagaaattagctgaagaatat
gatatgcttttgacatctttcatgggtatggacagacaaagtgtaatgagtgtttcaaca
cttgcattgaattgctcagttatggcctttactgctggttttgcttttctagttccagac
tggtgttcttctgaaatttataaagtttctgaatctagatacctagatgagactttgcat
gccttgctcattgaagatcttcttgggcgatttaagcatataggtcgcaagactagggaa
aatctcctattccttctgaagccctttcgcaactgtaacaggtgttcttcatcaaggttt
attactcaaacttgctcttatgagacagtaatcttacacaagctttgtgagtattctgtt
cgggagatttttaacttgttcagtgaggcagccaggagggaacgagatgctgatgcgttg
catcaaattattagtaggggtacagaagtgctaaggaatgttatctcaaatttgatgtta
gttcctttccacactcctcatcacttctttaaagtgaggtctgctgtttcctctgagctc
tttgtcatgaatgaagatgggcaagttttagatggatcgtccattttgttagggtcctct
ctctctctgaatttgagctttcaaatgaaaaacatgacaactggtctgccaagtccatca
aacaaagtgtactgcattcttggttgtaaaccccactctttggtaacaactagtattgga
gattttaaatggcaatcccaattgaggaaggaggaagatgagatggataatacaatggag
ttgaataagaagctgttcagatatgtcactggctctgtggagaccgaaggacactgcaga
agacgagacaatgatcgttttatggtaactgaatatgttcgttttgaacttaatgagcgt
ggccaaggtttctctacttgctttctcgatatctctattttacctgtaggagcttacgaa
atcatatcgcatagtggctacgttgacagtgaaggttcttaccggagcctcctttctgtg
aatgctggcccatcaattattgttaaggttgtaaagactgtgtaa
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