Salvia hispanica (chia): 125222812
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Entry
125222812 CDS
T09851
Name
(RefSeq) tubby-like F-box protein 5
KO
K19600
tubby and related proteins
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
shis03037
]
125222812
04990 Domain-containing proteins not elsewhere classified [BR:
shis04990
]
125222812
Cilium and associated proteins [BR:
shis03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125222812
Domain-containing proteins not elsewhere classified [BR:
shis04990
]
Other domain-containing proteins
Tubby family proteins
125222812
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tub
F-box-like
F-box
DUF3527
Motif
Other DBs
NCBI-GeneID:
125222812
NCBI-ProteinID:
XP_047981596
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Position
4:29977363..29979792
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AA seq
407 aa
AA seq
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MPFISILRDLKGKGGIDEKVEQECGLGERRSFDFSVEGSSSSCPVVEQSRWASLPLELLL
DIIGRVEADETTWPARRAVVCCAAVCRSWRGVVREVVQTPEECGLLTFPMSLKQPGPRDS
LIQCFIRRERETSTYRLYLGLSPAISGDASKFLLVAKRIKRATKTDFVISFAANDISHTS
EYYAGKLRSNFFGSKFYVHDSQPPCNAPIQSHGWSRKRISPKKVAPRIPICNFNVATVAY
ELNVLRTRGPRRMNCTMHMIPVSSTQEGGSAPTPATFSYGLDDTFSPFTPSVGRGQDSAS
DVPISGKCSSIGKQLILKNKIPRWHEQLQCWCLNFRGRATVASVKNFQLVASGEPSANVP
SPEQESVVLQFGKIGKDIFTMDYQYPLSAFQAFAICLSSFDTKPVCE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgccctttatatccattttaagagatctcaaggggaaaggggggatagatgagaaggta
gagcaggaatgtgggttgggggagcgtaggagcttcgattttagtgttgagggctcgtct
tcctcatgtccggtggtggagcagagccggtgggccagcttgccactggagttgcttctt
gatatcattggtagagtagaggctgatgagactacgtggcctgctcggagagctgtggtg
tgttgtgctgctgtttgcaggtcgtggaggggggtagttagggaggttgttcagactcct
gaagaatgtggtttgctcactttccctatgtctctgaagcagcctggaccaagggattct
ttgattcaatgcttcattagaagagaaagggaaacatcgacttatagattatacctcggc
ttaagccccgctatttcaggggatgcaagtaagtttttgttagtagcaaaacggatcaaa
agagctacgaaaacagattttgtcatatcttttgctgcaaatgatatttctcacaccagt
gaatattatgcaggcaaactgaggtccaacttctttggatccaaattctacgttcacgat
tctcagcctccgtgcaacgctccaatccaatctcacggttggtcgaggaaaagaatttcc
ccaaagaaggtggcaccaagaatacctatttgcaactttaatgttgcaactgttgcttac
gaacttaatgttctgcgtacaagaggaccaagaaggatgaactgcacgatgcacatgatt
ccggtatcatcaactcaagaaggtggaagtgctcccactcctgcaacatttagttatggt
cttgatgatacttttagccccttcacaccttccgtagggagaggacaggattctgcttcc
gatgtccctatcagtggtaaatgcagcagcattggtaaacaactcattttgaagaacaaa
attccgagatggcatgagcagctgcagtgttggtgtctgaacttcagagggcgtgctaca
gtggcatcggtcaagaactttcagctcgtagcttccggcgagccatcagcgaacgttcca
tccccggaacaagagagcgtggtcttgcaatttgggaagatagggaaagacatatttacc
atggactatcaatatcctctctctgccttccaagctttcgctatctgtttaagcagcttt
gatacgaaaccagtatgtgagtag
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