Salvia hispanica (chia): 125222892
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Entry
125222892 CDS
T09851
Name
(RefSeq) uncharacterized protein LOC125222892 isoform X1
KO
K15082
DNA repair protein RAD7
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125222892
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
125222892
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
125222892
NCBI-ProteinID:
XP_047981717
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All DBs
Position
4:45311607..45316305
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AA seq
865 aa
AA seq
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MTVLRSRDISSTAKSELSQASAPRNVVAEPVTPPKPSEFVNPSLKDVCTPKEDVLGPEIG
FVDGAGLVMVSESGNVRRVSARLAKKGGESVGVGSGKRKKVEGASLACVDTRNLKRRGSD
MKLGAGGSDGNTDANIVSEVSKDSDGGDFMELLEDSVKIEDGLSAARLEFGCDINYSVRE
TRDIGQCKKKSSMETKALGSESSGKDNLENGFLSLRSGKRVPQREINAIRIGGDSLQGIQ
RSKKSGTNCSDDVPVKSISEAKSDITTRGRLSKEGKGKMKLDSEASPSSGIETVKLSIEN
VNGSSGSGDDQLTPNEVLPDEVQVRGTNLSEIDTRSAHRARFRNFARRNASRFAHFSARD
EFGDRAHDASGTDVAPPETSNRIEDWPGPFSTAMKIIKDRETNRNGGKLGGSTDVSEMAK
LKWIPKNHESCRHQKHVPSLQDICLSILSSNADAITSLDFVPDALRHKICWFLCDKRSMD
GHFLELLVHDTPTEIRMRDCSWLSEEQFVKIFGGCNTSKLTVLQFDQGGACMPDYVLQST
LARLPNSLPDLTAISLKGAYRLSDAGLNMLASAAPSLKSVDIGQCPLLTSEGICSLASSL
RLVLRELYIDNSHGIDAMLILPALQMLENLEVLSVAGILTVSDDFVSEFVSTHGSRMKEL
VLADCKELTDSSLQVIGDKCANLQAIDLTNLDKLTDISIGHLANGCQAIQMLKLCRNSFS
DEAIAAYLDVNGAFLKCLSLNNVIQLCGLFQVSRLTALSLARNCKNLRSLDLSWCRNLTN
EALGLIVDSCLLLEVLKLFGCTQVTDVFVDGHSNPQVKLIGLKMTPVFKHIEFPDFLLGS
IHYCLHKRFILSFWAFPDMSACNGK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgttgaggtctagggatatttcgtctactgcgaaatcggagctttcgcaggca
tcggctccgagaaatgttgttgctgaacctgtgacgccgccaaaaccatctgaattcgtg
aatccgtcattgaaggatgtgtgcactccgaaggaagatgttttgggtccggagataggg
tttgtcgatggtgccggcttggttatggtttctgaaagtggaaatgtgcgaagagtcagt
gctcggttggcgaaaaagggaggggagagtgttggagttgggagtgggaagaggaagaaa
gtcgaaggggcttctctagcttgtgttgatacaaggaatctgaagagacgtggttctgat
atgaaattgggggctgggggttccgatgggaatactgatgcaaatatagtttcggaagtt
tcaaaggattcggacggtggagatttcatggagttgttagaagatagtgtgaagattgag
gatggtttgagtgctgccaggttagaatttggttgcgatattaattattctgtgagggaa
actcgggatattggccaatgcaagaagaaatcaagcatggagacgaaagctttagggtct
gaatcatctggaaaggataatctggagaatggtttcttgagcttgaggtcagggaagaga
gttccacagagagaaataaatgccattcgcattggtggtgattcattgcaaggaattcag
cgtagtaaaaaaagtggtacaaattgtagtgatgatgtacctgtgaagagtatatcagag
gctaaatctgatataactactagagggagactgagcaaagaaggaaaagggaaaatgaaa
ttggactctgaggcatctccctctagtggcattgagacagtgaaacttagcatagagaat
gtgaacggaagtagtggctcaggtgatgaccaattaacacccaatgaggtactgccagat
gaagttcaggttagagggactaatttgagtgaaattgatacaagaagtgcacatagggca
cgtttcagaaattttgccaggagaaatgcgtctagattcgctcatttttctgcccgagat
gaatttggtgaccgtgctcatgatgcttctggaactgatgtcgcacctcctgaaaccagt
aatagaatagaagattggcctggtcctttttctactgccatgaaaattattaaggatcgt
gaaactaataggaatggggggaagcttgggggttctactgatgtgagtgaaatggctaaa
ctgaagtggatccccaagaaccatgagtcttgtagacaccagaagcatgttccttcgttg
caagacatatgcttgtcaattctttccagtaatgctgatgctatcacttctcttgacttt
gtcccagatgcactgaggcacaagatctgttggtttctttgtgataagcgaagcatggat
ggtcattttcttgaattgcttgtgcatgatactccaacagagatccgcatgagagattgt
tcatggttatctgaggagcaatttgtcaagatatttgggggttgcaacaccagcaagtta
acggtgttacaatttgatcaaggtggagcctgtatgcctgactacgtcctacagtctacc
ctggctcgtttaccaaatagtcttcctgatttgacagcgatatccttgaaaggtgcatat
cgtctctcagatgctggacttaatatgcttgcctcagctgctccttctctcaaatctgtt
gatatcggtcagtgccccctgcttacctctgaaggaatctgttctctggccagctcactg
agattagttttaagggaattatacattgataattctcatgggatagatgctatgctcatt
ctcccagctctgcaaatgctagagaatctggaggttctatctgtagctggaattctaaca
gtttctgatgattttgttagtgaatttgtctccacacacggttccagaatgaaggagctt
gttttagcagattgcaaggagttgaccgattcttctttgcaagtcattggtgataaatgt
gctaacttacaagcaatagacctcacaaacttggacaaattgacggatatttccataggt
catcttgcaaatggttgccaggcaattcagatgctaaaattatgtcgcaactcattcagt
gatgaggctattgctgcatatcttgatgttaatggggcatttctcaagtgcttgtcactt
aataatgttatacagctgtgtggtttatttcaggtttcaaggcttactgctctatctctt
gcaagaaattgcaaaaacttacgtagtttggatctatcctggtgtcgcaatttaaccaat
gaagcactgggattgattgttgattcatgcttattgctagaagtgttgaaattgtttggc
tgcacacaggttacagatgtttttgttgatgggcactcaaatccacaagtgaaacttatt
ggattgaagatgactccagtatttaaacatattgaatttccggatttccttctaggatcc
atccattattgtctgcataagcgtttcatcttgtcattctgggcttttccagacatgtcc
gcctgcaatggaaaatga
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