Salvia hispanica (chia): 125222954
Help
Entry
125222954 CDS
T09851
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic-like isoform X1
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125222954
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shis01007
]
125222954
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shis03016
]
125222954
Enzymes [BR:
shis01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
125222954
Amino acid related enzymes [BR:
shis01007
]
Aminoacyl-tRNA synthetase
Class II (U)
125222954
Transfer RNA biogenesis [BR:
shis03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125222954
Prokaryotic type
125222954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
EAD7
Motif
Other DBs
NCBI-GeneID:
125222954
NCBI-ProteinID:
XP_047981818
LinkDB
All DBs
Position
4:60809..68448
Genome browser
AA seq
592 aa
AA seq
DB search
MPTVRVGRDRLFAALGRTYTQEEFEDLCFKFGIELDDVTTEKAIIRKEKHLEEEEPSEDE
EVIYKIEVPANRYDLLCLEGLSQALRIFAGLDPIPTYTVANISKESMLKMHVKPETSQIR
PYVVCAVLRGVTFDEARYNSFIDLQDRLHQNICRRRTLVAIGTHDLDTIEGPFTYEALSP
KDIKFTPLKQTRNFSADELMEFYKKDLKLKKFLHIIEGSPVYPVIYDQRRTVLSLPPIIN
GAHSAITLKTKNVFIECTATDLTKANIVLNTMVTMFSMYCERKFEVEPVEVTYTDGRSYV
SPDLSLYQMEVPLSYITKLIGVSLPAHESACLLNKMQLHAKHSISEKNEASFTISVPPTR
SDILHLCDVAEDVAIAYGYNEIPKITFPSVKPQLLNKFSDLIREEIATVGYTEVLTWILC
SSKEISTMLNREEDKTAAINGNPRSADFEVVRTTLMPGILKTVGHNKDHPKPIKIFEVGD
VVQLDKEKDVGASNHRKLAALHCGSTSGFELIHGLVDRIMEVMGTPFVSPGDKTGYYIES
SNEPEYLKGRQAHIIFKGEKIGNFGIVHPQVLHNFDIPDPCSFVEIDIEKLL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccgttagggtaggccgagatcgtctgttcgcagctctagggcgcacctacact
caagaagagtttgaagacttgtgcttcaagtttggaatcgagctcgacgatgtgacgacg
gagaaggcaattatacgaaaagagaagcatttggaagaagaggaaccgtctgaagacgag
gaagtgatttataaaattgaagttccagctaatagatatgatttactttgcctcgagggt
ttgtcacaagctctgcgaatatttgctgggcttgacccaatacctacttatactgttgcg
aacatcagcaaggaatctatgctcaaaatgcatgtcaaaccagagacatctcagatccgc
ccatatgttgtgtgtgctgttttaagaggtgttacatttgatgaagctcgatataatagc
ttcattgatcttcaagaccgccttcaccagaatatttgccggcgaagaactttggttgca
atcggtacacatgatttggatacaatagaaggcccttttacatatgaggctttatcacca
aaagacataaagttcaccccactaaaacagacaaggaacttctcagctgacgagctaatg
gaattttataagaaagatttgaaattgaagaagttcttacatataattgagggatcacca
gtttaccctgtcatatatgaccagagaagaactgttttgtccttgcctccaattattaat
ggtgcacattctgccattaccttgaagacaaagaatgtatttattgagtgcactgccaca
gacttgacaaaggccaatattgttttgaacacaatggttaccatgttctcaatgtattgt
gaaaggaagtttgaggttgagcccgtcgaagtgacttacaccgatggaagatcatatgtt
tcgccagatctgtctctttaccaaatggaggttcctttgtcatacatcaccaagcttatt
ggggtatccctgccagcccatgagtctgcttgtctgttgaataaaatgcaattgcatgcc
aagcactcgatatcagagaagaatgaagccagcttcacaatatcagttcctcccactaga
agtgacattcttcatctttgtgatgtggccgaggatgtggctattgcttatggctacaat
gaaattccaaagataacatttccatctgtgaagccacaattattgaataagttcagtgat
cttattcgagaagagattgcaacagttggttacaccgaggttttgacttggatattatgc
tcaagcaaagaaatttccaccatgcttaaccgtgaggaagacaaaactgcagcgattaat
ggaaatcctcgctcagcggattttgaggttgtccgcaccactcttatgcccggcatattg
aaaacagttgggcacaataaagatcatccaaaaccaatcaaaatatttgaagtgggtgat
gtggtgcaattggataaggaaaaagatgttggtgcatccaatcatcgaaagcttgcagct
ttacattgtggatctacctctggatttgagcttatacatggccttgtagatagaatcatg
gaagtaatgggaactccatttgtatcacctggtgacaagacaggctactacatagaaagt
tcaaatgagccggagtatcttaaaggtagacaagcacacatcatattcaaaggagagaaa
attggcaattttggaatcgtgcatccacaggttttgcataactttgacattccagacccg
tgctcatttgtggaaatcgacattgagaaattactctaa
DBGET
integrated database retrieval system
