KEGG   Salvia hispanica (chia): 125223093
Entry
125223093         CDS       T09851                                 
Name
(RefSeq) LEC14B homolog
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
shis  Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:shis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shis04121]
    125223093
Ubiquitin system [BR:shis04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     125223093
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_RIG_2nd Cytochrom_D1 WDR54
Other DBs
NCBI-GeneID: 125223093
NCBI-ProteinID: XP_047982022
LinkDB
Position
4:54555969..54560067
AA seq 473 aa
MSRVRGYINPGVGFDEYAESCGYVRIGCADDEFAQVTKLRSAPHKHLRHVLPGESTAPLV
SPVQMMMGRECNYSGKGRFSTSDSCHVLSRYLPVRSTPSVVDKMTSCAYVSQFSDDGSLF
VAGFQESHIKIYDVDHGWKVHKDIYARSLRWTITDTSLSPDRRFLVYSSISPVVHIVDVG
SGTKQSLANVTEIHEGLEFSSNVDDYENYSFGIFSVKFSTDGREIVAASSDDAIYVYDLE
ARKLSLRIPAHRADVNSVCFADESGNIIYSGSDDRLCKVWDRRCLATKGQAAGVLMGHLE
GITFIDTRGDGRYFISNGKDQSIKLWDIRKMSSNVNYVPRRRYSEWDYRWMEYPEQARNL
KLRDDLSIATYKGHTVLRTLIRCYFSPAFSTGQRYIYTGSTDSCVYVYDVLSGDLVAKLD
YHEDPVRDCNWHPFYPMLVSSSWDGMVARWEFPDNGKTTSPAVPVRRRRRFFY
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgagtagggtgagaggatacattaatcctggagttggcttcgacgagtatgcagaatcg
tgtggctatgtccgaataggctgtgccgatgatgaatttgcgcaggtgacaaagttaagg
tccgcgccacacaagcatctgaggcatgtgttgcctggagagagtactgcaccgctcgtt
tcgccagtgcaaatgatgatgggtagagagtgcaactacagtgggaaagggaggttttct
acatcagattcttgtcatgttttgagccggtatttgcctgtccgtagtaccccctctgtg
gttgataagatgacgagttgtgcatatgtgtcgcaattttctgatgatggttctcttttc
gttgctggatttcaggaaagtcatatcaaaatatatgacgttgatcatggatggaaagtt
cataaagatatttatgctaggagcttgaggtggactatcactgatacttctctgtcacca
gatcgtcgatttcttgtatattcaagcatctctccagttgtccatattgtagatgttgga
tctggtacaaagcagtctcttgcaaacgtgacggagattcatgaaggtcttgaattttcg
tccaacgttgatgattatgagaactattcttttggcatcttctccgtaaagttttctact
gatgggcgagaaattgttgctgctagcagtgatgatgcgatatatgtttatgatcttgaa
gccagaaagctaagcctccgaattccagctcatcgggctgatgtcaattctgtatgcttt
gcggatgaaagtggcaacatcatatattcgggaagcgatgatcgcctgtgcaaagtttgg
gacaggcgttgccttgcaaccaaggggcaagctgctggagtcctgatgggacatttagaa
ggcatcacattcattgatacccgtggagatggacgttactttatctcaaatggaaaagat
caatccattaaactttgggacataaggaagatgtcatctaatgtcaattacgtgccaaga
cgccgatattctgaatgggactatagatggatggaatatcctgaacaggctagaaatctg
aagcttcgcgatgatctgtcaatagctacgtataagggacatactgtcttacgcactctg
atacgctgttatttctcgccagcatttagcaccgggcaaaggtatatatatacgggatca
actgattcttgcgtttatgtttatgatgtgttgagtggcgatctagttgcaaaactcgat
taccatgaggatccggtgcgggactgcaactggcacccgttctaccctatgctggtgagc
tcatcctgggatggtatggttgcgcgttgggagttcccggataacgggaaaaccacgtcg
ccggctgtaccagtcagaagaaggagacggtttttctactag

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