Salvia hispanica (chia): 125223093
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Entry
125223093 CDS
T09851
Name
(RefSeq) LEC14B homolog
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125223093
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125223093
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Cytochrom_D1
WDR54
Motif
Other DBs
NCBI-GeneID:
125223093
NCBI-ProteinID:
XP_047982022
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All DBs
Position
4:54555969..54560067
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AA seq
473 aa
AA seq
DB search
MSRVRGYINPGVGFDEYAESCGYVRIGCADDEFAQVTKLRSAPHKHLRHVLPGESTAPLV
SPVQMMMGRECNYSGKGRFSTSDSCHVLSRYLPVRSTPSVVDKMTSCAYVSQFSDDGSLF
VAGFQESHIKIYDVDHGWKVHKDIYARSLRWTITDTSLSPDRRFLVYSSISPVVHIVDVG
SGTKQSLANVTEIHEGLEFSSNVDDYENYSFGIFSVKFSTDGREIVAASSDDAIYVYDLE
ARKLSLRIPAHRADVNSVCFADESGNIIYSGSDDRLCKVWDRRCLATKGQAAGVLMGHLE
GITFIDTRGDGRYFISNGKDQSIKLWDIRKMSSNVNYVPRRRYSEWDYRWMEYPEQARNL
KLRDDLSIATYKGHTVLRTLIRCYFSPAFSTGQRYIYTGSTDSCVYVYDVLSGDLVAKLD
YHEDPVRDCNWHPFYPMLVSSSWDGMVARWEFPDNGKTTSPAVPVRRRRRFFY
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagtagggtgagaggatacattaatcctggagttggcttcgacgagtatgcagaatcg
tgtggctatgtccgaataggctgtgccgatgatgaatttgcgcaggtgacaaagttaagg
tccgcgccacacaagcatctgaggcatgtgttgcctggagagagtactgcaccgctcgtt
tcgccagtgcaaatgatgatgggtagagagtgcaactacagtgggaaagggaggttttct
acatcagattcttgtcatgttttgagccggtatttgcctgtccgtagtaccccctctgtg
gttgataagatgacgagttgtgcatatgtgtcgcaattttctgatgatggttctcttttc
gttgctggatttcaggaaagtcatatcaaaatatatgacgttgatcatggatggaaagtt
cataaagatatttatgctaggagcttgaggtggactatcactgatacttctctgtcacca
gatcgtcgatttcttgtatattcaagcatctctccagttgtccatattgtagatgttgga
tctggtacaaagcagtctcttgcaaacgtgacggagattcatgaaggtcttgaattttcg
tccaacgttgatgattatgagaactattcttttggcatcttctccgtaaagttttctact
gatgggcgagaaattgttgctgctagcagtgatgatgcgatatatgtttatgatcttgaa
gccagaaagctaagcctccgaattccagctcatcgggctgatgtcaattctgtatgcttt
gcggatgaaagtggcaacatcatatattcgggaagcgatgatcgcctgtgcaaagtttgg
gacaggcgttgccttgcaaccaaggggcaagctgctggagtcctgatgggacatttagaa
ggcatcacattcattgatacccgtggagatggacgttactttatctcaaatggaaaagat
caatccattaaactttgggacataaggaagatgtcatctaatgtcaattacgtgccaaga
cgccgatattctgaatgggactatagatggatggaatatcctgaacaggctagaaatctg
aagcttcgcgatgatctgtcaatagctacgtataagggacatactgtcttacgcactctg
atacgctgttatttctcgccagcatttagcaccgggcaaaggtatatatatacgggatca
actgattcttgcgtttatgtttatgatgtgttgagtggcgatctagttgcaaaactcgat
taccatgaggatccggtgcgggactgcaactggcacccgttctaccctatgctggtgagc
tcatcctgggatggtatggttgcgcgttgggagttcccggataacgggaaaaccacgtcg
ccggctgtaccagtcagaagaaggagacggtttttctactag
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