Salvia hispanica (chia): 125223100
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Entry
125223100 CDS
T09851
Name
(RefSeq) protein CHROMATIN REMODELING 19 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shis03036
]
125223100
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125223100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
ERCC3_RAD25_C
DUF1689
VGPC1_C
Roughex
Motif
Other DBs
NCBI-GeneID:
125223100
NCBI-ProteinID:
XP_047982035
LinkDB
All DBs
Position
4:5404979..5411865
Genome browser
AA seq
752 aa
AA seq
DB search
MKRERELLELSDDEWTPHSDSFKPSRVLKPNPPSPNPPPPIESFAFSKTTSNSHEILVLD
TSSSDGAGPGNGDEFEDLEDDDAELEVEVTRRASTSTRGSRFVIDDDDEEEDDGAAADDE
DGDYSDPEVWIEEKEEEDDVVKKALRKCGEISAELKQELYGTSAVACDQYSEVELGSAAA
ARIVTQDDVNDACGAGEDFQPILKPYQLIGVNFLMLLYRKKIGGAILADEMGLGKTVQAI
TYLTLLKYLEDDPGPHLIVCPASLLENWERELKKWCPSFTVLQYHGAARSAYSRELNSLG
KAGRPPPFDVFLVCYSLFERHSLQQKEDRKILRHWKWSCVLMDEAHALKDKNSFRWKNLM
SVAKNSRQRLMLTGTPLQNDLHELWSLLEFIMPGLFETGDVDLKKLLNAEDRDLICRMKS
ILGPFILRRLKSDVMQQLVPKTQKIEYVCMGKEQEDAYKEAIENYRAMSQARFLKSSETN
ISNVAKILPRRQISNYFLEFRKIANHPLLVRRAYTDDDVLRIAKMMHPKGVFGFECTLER
VVEELKSYNDFSIHRLLLFYGDTDLKGTLSDDHAMVSAKCRALGELLPKLNRAGSRVLIF
SQWTSMLDILEWTLDVIGVTYRRLDGSTQVKERQTIVDTFNKDTSIFACLLSTRAGGQGL
NLIGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIYRLVTKGTVDENVYEIAKRKLT
LDAAVLESGVVEDEGEMPDKTMAEILSSLLLH
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagagagagaattgctcgaactctccgacgacgaatggactccccactccgat
tccttcaaaccctcgcgcgtcctcaagcctaatcccccttctccaaaccctcctcccccc
atcgagtccttcgctttctccaaaaccacttccaattcccatgaaatcctcgtcctcgac
acctcttcctccgatggcgccggccccggcaacggcgacgagtttgaggatttggaggac
gacgacgctgagctcgaggtcgaggtcactaggagagcttccacgagcactcgggggagc
aggttcgtgatcgacgacgacgacgaggaagaggatgatggcgccgccgcggacgacgag
gacggtgactatagcgacccggaggtgtggatagaggagaaggaggaggaagatgatgtt
gtgaagaaggctttacggaaatgtggggagatttcggctgaattgaagcaggagttgtac
ggaacaagcgcggttgcatgtgatcagtactcggaggtggaattggggtctgctgctgct
gctaggattgtcactcaggatgatgtgaatgacgcatgcggagctggggaagattttcag
cctatactaaagccgtaccagctaattggagtcaattttcttatgcttttgtataggaag
aaaattggtggagctatcttggcagatgagatgggtcttggaaagactgttcaggccata
acgtatctgactctgttgaagtatctggaagatgatcctgggccccatttaattgtatgt
cctgcttctcttttggaaaattgggaaagggagcttaagaagtggtgtccatcatttact
gtgcttcagtatcatggtgctgcacggtcagcttattcaagagaattaaattctctggga
aaggctggacggccaccgccatttgatgtttttcttgtgtgctattcgctttttgaacgc
cacagtttgcagcagaaagaagaccgcaaaattctgagacattggaagtggagttgtgtt
ctaatggatgaagctcatgcattaaaggataagaatagtttcaggtggaaaaatttgatg
tcagttgcaaaaaattcaaggcagcgactgatgcttacaggcacaccactgcagaatgat
ttgcatgagctgtggtcgttgttggagtttataatgccaggactttttgaaactggggat
gttgacttgaaaaagttgttgaatgcagaagacagagatctaatatgtagaatgaagtcc
attcttggaccatttatcttaagacgattaaaatcagatgtaatgcaacagctagttccg
aagacgcagaagattgaatacgtttgcatgggaaaagaacaagaagatgcttataaagaa
gcaattgagaattaccgtgcgatgtctcaagctcgttttctgaagtcatctgaaactaac
ataagtaatgtggccaaaatactccctcggcgacaaatttccaattactttctggaattc
cgaaagatagcaaatcatccattattagtgaggcgcgcctacacagatgatgatgttctt
cgtattgctaaaatgatgcatccaaaaggcgtgtttggcttcgaatgtaccttagaacgc
gtggttgaggagcttaagagctacaatgacttctctattcatcggctcctacttttctat
ggagatactgacttgaaaggaactctctctgatgatcatgctatggtttctgcaaaatgt
cgagcattgggtgaacttctccctaaattaaatcgtgctgggagtcgcgtccttattttt
agccaatggacgtcgatgcttgatatattggagtggactttggatgtgattggtgtgacc
tacaggcgccttgatggaagtacacaggtgaaagagagacagacaattgtggataccttc
aacaaggacacttcaatatttgcgtgtttgttgtccacaagggccggaggacagggattg
aacttgatcggagctgatacagttataatccatgacatggattttaatccccagattgat
cgtcaagcagaagatcgatgtcatcgcattggccaaacaaagcctgttacaatatacagg
cttgtgacgaagggcacggtggatgagaacgtttatgagattgcaaagaggaaactaaca
ctggatgcagctgtccttgaatctggagtggtagaagatgaaggagagatgcctgataag
actatggcagagatattatcttccttattgttgcactaa
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