Salvia hispanica (chia): 125223110
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Entry
125223110 CDS
T09851
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125223110
04121 Ubiquitin system [BR:
shis04121
]
125223110
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125223110
Membrane trafficking [BR:
shis04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125223110
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125223110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING-like
Rad50_zn_hook
Prok-RING_1
zf-RING_10
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
125223110
NCBI-ProteinID:
XP_047982055
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All DBs
Position
1:2743905..2745711
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AA seq
380 aa
AA seq
DB search
MSSTYWCHRCNRFLRALNPESIDCPDCSSGFVEEVEAPPPPSSISDSRQRRFPAAAMYMM
QAPEPCPIPGPASVSSPRLRRSRRNGGDRSPFNPVILLRGGASDGGGGGGGGGGGFELYY
DDRAGSGLRPLPATMSEFLLGSGFDRLLDQLSQIEANGMGRIDSNPPASKAAIEAMPTVP
IIDRHIAIESHCAVCKEAFELGSDAREMPCSHLYHQDCILPWLSLRNSCPVCRHELTAED
NENGNGGGDAGRGGGNEVGSEDETVGMTIWRLPGGGFAVGRFSGGGRGELPVVYTEMDGG
FNNNGVPRRVSWSSRGSVSRNRGGLRRLLTGFMSCFGRSGSSTSTPRISRRSGSLSSVFS
TTHTRRARAADESFQRIGED
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccacatactggtgccacagatgcaaccgcttcctcagggctttgaatccggaa
tccatcgattgccccgattgcagctccggattcgtcgaagaggtcgaggctccgccgccg
ccgtcttcaatttccgactccaggcaacgccgcttccccgccgcggctatgtacatgatg
caggcgcccgagccatgccctattccggggccggcgtccgtatcgagccctaggctgcga
aggagccgcagaaatggaggcgatcggtcgccgtttaatcctgtcatccttctccgtggt
ggcgccagcgatggcggaggtggaggtggaggcggtgggggagggtttgagctgtattac
gacgacagagcggggtcggggctgcggccgctaccggcgacgatgtcggagtttttgctc
ggttcgggcttcgacaggctgctggatcagctatcgcaaattgaggcgaacgggatgggg
agaatcgacagcaatccgcccgcatcgaaggccgccatcgaggctatgccgaccgtgccg
ataatcgatcgccacattgcgattgaatcgcactgcgcggtctgcaaggaggcgttcgag
ctggggagcgacgcccgcgagatgccctgcagtcatctgtaccatcaggactgcatcctg
ccgtggctctcgttgaggaattcgtgccccgtgtgtaggcacgagctgacagccgaggat
aatgagaacgggaatggcggtggggacgcgggtagaggaggagggaacgaggtggggagt
gaggatgagacggtggggatgacgatatggagattgcccgggggtggttttgcagtgggg
aggttttctggaggggggagaggcgagctcccggttgtttacacggaaatggatggcggg
ttcaataacaatggggtgccgaggagggtttcttggagttctagaggtagcgtttcgagg
aacaggggaggattgaggaggctgctaaccggcttcatgtcttgttttgggagaagtgga
tcttccacttctacacctaggattagtcggaggagtggctcgttgtcatcggtttttagc
accacacatacacgacgagcaagagctgcagatgagtcgtttcaacgaataggggaggat
tga
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