KEGG   Salvia hispanica (chia): 125223169
Entry
125223169         CDS       T09851                                 
Name
(RefSeq) histone deacetylase 9
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
shis  Salvia hispanica (chia)
Pathway
shis03082  ATP-dependent chromatin remodeling
shis03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    125223169
   03083 Polycomb repressive complex
    125223169
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:shis03036]
    125223169
Enzymes [BR:shis01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     125223169
Chromosome and associated proteins [BR:shis03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     125223169
   HDAC complexes
    Sin3A-HDAC complex
     125223169
    BRAF-HDAC complex
     125223169
    REST complex
     125223169
    SHIP complex
     125223169
    MiDAC complex
     125223169
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     125223169
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    125223169
  Chromatin remodeling factors
   NuRD complex
    125223169
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 125223169
NCBI-ProteinID: XP_047982138
LinkDB
Position
4:complement(40591402..40596905)
AA seq 430 aa
MRTKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLAYELHNKMEIYRPHKAYPVEL
AQFHSPDYVEFLQRITPDKQQLFANEMAKYNLGEDCPVFENLFEFCQIYAGGTLDAARRL
NNRLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDVKDVGEKEGKNYAINVPLRDGIDDGSFLRLFKT
IILKVVECYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAACVKFVKQLNLPLLVTGGGGY
TKENVARCWTVETGALLGVELPSEIPENEYFKYFAPDYSLKCPSGHMENLNSKSYLNNIR
QQVCENLSAIQHAPGVQMQEVPPDFYIPDLDEDEQNPDERVNRQMQDKHVQRDDEYYEGD
NDNDQNNDGT
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgcaccaaggacaggatttcctatttctatgacggggatgtggggaacgtttatttc
gggcctaatcatccaatgaagccgcaccgtttgtgcatgacgcaccatttggttctggca
tatgagcttcacaataagatggaaatctataggcctcacaaggcttatcctgtggagcta
gctcagttccattctccggattatgttgagtttctgcagagaatcactcccgacaagcag
caactcttcgctaatgagatggccaaatataatcttggtgaagattgtccagtctttgag
aatctgtttgagttctgtcaaatttatgctggcggtacattagatgctgcacggagatta
aataatcggctgtgtgacattgccataaattgggctggtggattgcatcatgcaaagaag
tgcgaggcgtctgggttctgttacattaatgaccttgtgttgggaattctggagctcttg
aagtaccatgctcgtgtgttatatattgatattgatgtccaccatggtgatggggtggaa
gaagccttttattttactgatagggtgatgacagttagtttccacaagtacggtgacttg
ttctttcctggaacaggtgatgtcaaggatgttggagaaaaagaaggcaaaaattatgct
ataaatgtgcctcttagggatggaatagatgatgggagcttcttacgtctctttaaaacg
atcattttgaaagttgttgagtgctatgctcctggagccattgttctccaatgtggagca
gattcacttgccggggacagattgggatgcttcaacctttctattgatggtcatgcagct
tgtgtgaagtttgtcaagcaacttaatctgcctttgctggtaactggaggtgggggatac
accaaagagaatgtggccagatgttggactgtggagacaggggcacttctaggtgtggag
ctccctagtgagataccagaaaacgagtacttcaaatattttgctccggattactcgttg
aaatgtccaagcgggcacatggagaatttgaacagcaaatcataccttaacaacatccgg
caacaagtttgcgaaaatcttagtgccattcaacatgcacctggagtacaaatgcaagag
gtgcctccggatttttatattcctgatcttgatgaggatgagcagaatcctgatgaacgt
gtaaatcgacaaatgcaagacaagcatgttcagcgtgatgacgaatattatgaaggtgat
aatgacaacgatcagaacaacgatggtacgtag

DBGET integrated database retrieval system