KEGG   Salvia hispanica (chia): 125223285
Entry
125223285         CDS       T09851                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
shis  Salvia hispanica (chia)
Pathway
shis03020  RNA polymerase
shis03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    125223285
  09124 Replication and repair
   03420 Nucleotide excision repair
    125223285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shis03021]
    125223285
   03400 DNA repair and recombination proteins [BR:shis03400]
    125223285
Transcription machinery [BR:shis03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     125223285
  RNA polymerase III system
   RNA polymerase III
     125223285
  RNA polymerase I system
   RNA polymerase I
     125223285
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      125223285
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 125223285
NCBI-ProteinID: XP_047982323
LinkDB
Position
4:43976555..43979143
AA seq 145 aa
MVETLFEDIFRIDAIDPDGKKFDRVSRISARSEQFDMLMHLDINTEIYPMRAGEKFMMVL
ASTLNLDGTPDSGYYTPGNKKSLADKFDYVMQGKLYRISEESSEKQVKADIYVSFGGLLM
MLKGDPSIAARFELDQRLFILIRKV
NT seq 438 nt   +upstreamnt  +downstreamnt
atggtggagacactttttgaagatatatttcgaattgatgcgattgatccagatggaaaa
aagtttgatcgggtctctcgtatttccgctaggagtgagcagtttgacatgttgatgcac
cttgatatcaacactgagatttatcctatgcgtgctggggagaagttcatgatggtatta
gcatccactctgaacttggacggaacgcccgattctggttattacactccgggtaacaag
aagtcgcttgctgataagttcgactatgtcatgcaaggtaaactgtacagaatctccgag
gaatctagcgagaagcaagtcaaagcggatatatatgtctcgttcggtggactgcttatg
atgctgaagggggatccttccattgccgctagatttgagcttgaccagaggctgttcatt
cttattaggaaggtttga

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