Salvia hispanica (chia): 125223310
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Entry
125223310 CDS
T09851
Name
(RefSeq) scarecrow-like protein 9
KO
K27753
GRAS family protein LISCL
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125223310
Transcription factors [BR:
shis03000
]
Eukaryotic type
Other transcription factors
GRAS
125223310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
125223310
NCBI-ProteinID:
XP_047982348
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All DBs
Position
4:33236563..33239867
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AA seq
759 aa
AA seq
DB search
MDPRFHGILNSSSGVGLENQSISGYSNGHRFGISYPDQKLVNGHRNQGSSFQEHGIGGVH
LVLDQPFSNRNGEGAVSSSFLDIDDDCDFSDAVLRYIDQILMEEDMEEKTHMLQESLDLQ
AKERSFYEVLGKKYPPSPQKEPGATGHECGDDSNPNFSCFNSTTSSSDGSGYLIDIVDPS
WMISTRADHDVSTSCRAAKSSVCSTLNSTSNFLVDGWFSDSPVSPLQVRDMYNENQLVWN
FRRGADEASKFLPAGNNLLVSAGVDTLATQDARGGEFEARSDAEKQLPSASRGKKSRSTS
DMDLEEERSCKVLANYAESDSELPVEEFDDVLLHTLGDPEKKFAAFREVLQNASCKRTQQ
NGKTKRPTGGRGRAKKQNKKKEVIDLRTLLITCAQAVAADDRRSASDLLKQIRQHSSPYG
EGNQRLAHYFADGLEARLAGTGSQIHKALVSKKTVAADYLKAYYTYLASSPFKKISNFTS
NKTIMFESIKAARVHVIDFGILYGFQWPTLIQRISDREGGPPMLRITGIDFPQPGFRPAE
KIEETGRRLARYAKKFNVPFEYNAIAKKWENIKLEDLNIKEGEFVIVNSMYRAKNLLDET
VLAESSRSMVLNLIRKINPDLFIHGIVNGAYSAPFFVTRFREVLFHFSALFDMLETNVPR
DQPERMLIERDIFGSEALNVIACEGWERVERPETYKQWQVRHLRAGFTQVPLDRWIMERA
IYKVRTHYHKDFVIDEDSHWMLMGWKGRIIYAISCWKPV
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagatttcatggaatcttgaattcttcgagtggagttggattggagaatcaa
tcaatttctggctattcaaatgggcatagatttgggattagttatccagatcagaaatta
gtgaatggacatagaaatcagggttcctcatttcaagaacatggcattgggggtgtgcat
ttggtcctagaccaacccttctcgaacaggaatggggagggggctgtctccagctcattc
ttggacattgatgatgactgtgatttctcggatgctgtcttgaggtacattgatcagata
ctgatggaggaggacatggaggagaagactcacatgcttcaggagtcattggatttgcag
gcgaaggagaggtccttctacgaggttcttgggaagaagtacccgccttcgccacagaaa
gaaccaggggccactggccatgagtgtggagatgatagtaatcctaattttagttgcttt
aactcaacaactagcagtagtgatggaagtggatacctaattgacattgttgatccgagt
tggatgatcagcactcgcgcggatcatgatgtcagtacatcttgtcgtgctgctaagtca
tccgtttgctccacattgaatagcacgagcaatttcctagtagacggttggttctctgac
tctccagtgagcccccttcaagtacgtgatatgtacaacgagaaccagctcgtgtggaat
ttcagaaggggggctgatgaagctagcaaattccttcctgccgggaataatttgttggtg
agtgccggtgtagacaccttagccactcaggatgcgaggggaggggagtttgaggctaga
agcgatgcggagaagcagttgccttctgcatcacggggaaagaagagtcgttctacatcg
gacatggatttggaagaagagagaagttgtaaagtgctggctaattatgcagaatcagac
tcagaactccctgtggaggaatttgatgatgtcttgcttcacacgctgggggatcccgag
aagaagtttgcagctttcagagaagtcctgcagaatgcatcttgcaagaggactcagcag
aatgggaagacgaaacggcctactggcgggaggggccgagctaagaaacagaacaagaaa
aaggaagtgatagatttgagaacccttttaatcacctgtgcacaggctgttgctgctgat
gatcgtcggagtgccagcgatctactcaaacagatcaggcagcattcctctccctatggt
gaagggaaccagaggctagctcattattttgctgatggcctcgaagcacgtctggctgga
acgggtagccagattcataaagctctcgttagtaagaaaacagtcgcagccgattacttg
aaagcttactatacttacctagcatcgtctccgtttaagaagatctccaattttacctca
aacaagacaataatgtttgagtcaataaaagcagcacgtgtgcatgttatagattttggg
atcctttacggcttccagtggccgacattaatccagcgtatatctgaccgagaaggtggt
cctccaatgcttcggataactggcatagacttcccacagcctggcttccgacctgcagag
aagattgaggagacagggcgtagattggcccgttatgccaaaaagttcaatgtgccattc
gagtacaatgctatagctaagaagtgggagaacatcaaattagaggacctcaatatcaag
gagggtgaatttgtgatcgtaaacagcatgtatcgggccaagaacttactcgatgagacg
gtcctggctgagagctcgagatctatggttcttaacttaattaggaagatcaatccggac
cttttcatacatgggatagtaaatggggcttatagtgcgccattctttgtcactcgtttc
cgggaggtactattccacttctcagctctatttgacatgctggagacgaacgtgcctagg
gaccagccggagaggatgcttattgagagggacatctttgggagcgaggcattgaatgtc
attgcttgtgagggctgggagagagttgagagacccgaaacgtacaagcagtggcaagta
cgtcacctgagggcaggcttcacgcaagtgcctcttgataggtggatcatggagagggca
atctacaaggtcaggacacattaccacaaagactttgtcatcgatgaagatagccattgg
atgttgatgggttggaaagggcggatcatctacgccatatcgtgctggaagcccgtttga
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