Salvia hispanica (chia): 125223318
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Entry
125223318 CDS
T09851
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125223318
Transcription factors [BR:
shis03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125223318
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
DUF7128
Motif
Other DBs
NCBI-GeneID:
125223318
NCBI-ProteinID:
XP_047982364
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Position
4:complement(5373546..5378149)
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AA seq
498 aa
AA seq
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MAASSSSSAFLSLRDENEQQQQIPPPSAPPPTNKRRRNQAGNPNPDAEVIALSPKTLMAT
NRFVCEVCNKGFQREQNLQLHRRGHNLPWKLRQKSTKEVKRKVYLCPEPSCVHHDPSRAL
GDLTGIKKHYSRKHGEKKYKCEKCSKKYAVNSDWKAHSKTCGTREYRCDCGTLFSRRDSF
ITHRAFCDALAQESARNLNPPSIGSHLLGLSQQDKMNQGALSSHDILRLGRPSPRYETLV
SPGGFSPSPRPSFVHPNHDHDHQNQPSHNSMFPNKSSLQGLMHLPQLHMNNTSPTSSTGL
FNLSFFPGNTNNNATSTMEGGLHHSTAGEDSTLFSSGNLMSIAIPSLYSTSHGMQSPSGG
AQMSATALLQKAAQMGSNTSNNGGASSSLLKSFGKSPDHHSFGDGSIYNGGGNHMQELMN
SIAAAGVGPGAASMFEQAEYRGFHGGNSNGLSSLEQAGRLTRDFLGVGEIVRSVREQQQS
GMDHLGKQTQPFGEGSFH
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttcttcttcttcatcagctttcctttcgttaagagacgaaaacgagcagcag
cagcagattcctcctccttccgcgccgccgccgacaaacaagagaaggcggaaccaggct
ggaaatccaaatccggatgcggaagtaattgcgctgtcgccgaagacgctgatggcgacg
aaccggttcgtgtgcgaggtgtgcaacaagggcttccagagggagcagaatctgcagctg
catcgccgcggccacaatctgccgtggaagctgcggcagaagagcacaaaggaggtgaag
cggaaggtgtatctctgccccgagccgagctgcgtgcaccacgacccgtcccgcgcgctc
ggggacctcaccggaatcaaaaagcactactctagaaagcacggcgagaagaagtacaag
tgcgagaaatgctcgaagaaatacgctgtgaattccgactggaaagctcattcgaaaacc
tgcggcacaagagagtatcgatgcgactgcggcacccttttctcaaggcgcgacagtttc
atcactcaccgagccttctgcgacgcgctggctcaggagagtgcacggaacctgaacccg
cccagcatcgggagccacctcttagggctctcccaacaagataagatgaaccaaggagcc
ctatcaagtcatgacatacttagattgggcaggcccagcccccgatacgaaaccctagtc
agcccgggaggcttcagcccttcgccccggccctcattcgtccacccgaatcacgaccac
gatcatcaaaatcaaccttcccataattccatgtttcccaacaaatcatcactgcaaggc
ctcatgcaccttccccaactccacatgaacaacacctcccccacctcctccaccggcctc
ttcaacctcagcttcttccccgggaacaccaacaacaacgccacctccaccatggaaggt
ggcctccaccactccacagccggagaagactccaccctcttctcatcaggtaacctcatg
agcattgcgatcccatcgctgtacagcacctcgcacggtatgcaaagccccagcggagga
gctcagatgtcggcgacggcgctcctccagaaggcggcccagatgggctccaacaccagc
aacaacggcggcgcgtcttcgtcgctgctgaagagcttcgggaagtcacccgaccaccac
agcttcggggatggaagcatctacaatggaggaggaaaccatatgcaggagttgatgaac
tccatcgcggcagcaggagtgggcccgggggcggcgtccatgttcgagcaggcagagtac
agagggttccatggagggaacagcaatggattgagcagcttggagcaagcggggaggctg
acaagggattttcttggagttggagagattgtgagaagtgtgagagaacagcaacaaagt
gggatggatcatctcggaaaacaaacacagccttttggagaggggagttttcactga
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