Salvia hispanica (chia): 125223335
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Entry
125223335 CDS
T09851
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125223335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shis03032
]
125223335
03036 Chromosome and associated proteins [BR:
shis03036
]
125223335
03400 DNA repair and recombination proteins [BR:
shis03400
]
125223335
Enzymes [BR:
shis01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
125223335
DNA replication proteins [BR:
shis03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125223335
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
125223335
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
125223335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
WGR
PADR1_N
Zn_ribbon_PADR1
BRCT_2
BRCT
BRCT_3
BBS7_hp
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
125223335
NCBI-ProteinID:
XP_047982399
LinkDB
All DBs
Position
4:complement(31268746..31276918)
Genome browser
AA seq
992 aa
AA seq
DB search
MANPPKPWKAEYAKSSRSSCKTCKRSIDKETLRLGKMVQASQFDGFMPMWNHASCILRKA
KQIKLVDDVEGLESLRWDDQQRIRKYVEDAVVSSSTAVQNVECGVDVSPSARATCRSCKE
KIAKGELRISTKPQGARTLSWNHAKCYLDTTSDPQLEKFSGLDSLTASDRATLQSLVKKP
SAPGGTKLEHDDKGGLQQAEAKGGAKRKRALESDDAPLSKTSSSKNTKDLKDEKPALENQ
LEMQSKSLWALKDDLKKHVTTSELKEMLEVNEQDSKGSELDLRARWFELFFLIADGMFFG
ALAKCPICSGCLHYSSGMYRCSGYLSEWSKCSYASHEPQRIKGKWKIPEETSNDHLVRWF
KSQKVKKPERVLPPKSPGGPSGSQFASGLSPSSKVENIGDLKVAIAGVPDKSVEEWKNKI
EGSGGQVHMKIKKETNCLVVSGMLDNTAAEVKKARRMKLPIVREDYLVDCIKRQKKLPFD
SYRVEAIEKTHSMATIKVKGQSAVHMQSGLQDSGHILEDGKSIYNTTLNMSDLSTGVNSY
YILQVIQDDKSSDCFVFRKWGRVGNEKIGGNKLEEMHKSDAIQEFKRLFLEKTGNTWESW
ERKEDFHKQPGRFFPLDIDYGVKDSSKKKQLDFTSSKLAPQLVELMKMLFNVEAYREAMM
EFEINLSEMPLGKLSKSNIQKGFEALTQIQNLLKNNDYDPTVKESLIVDASNKFFTVIPS
IHPHVIKDEDDFKLKVKMLEALQDIEIASKLVGFDANTDESIDEKYEKLRCHVSPLSHDS
EEFRLIKKYLQTTHAPTHTEWALELEEVFSLERQGEMDKYAPYRSKLKNKMLLWHGSRLT
NFVGILSQGLRIAPPEAPATGYMFGKGVYFADLVSKSAQYCFTDRKNPVGLMLLSEVALG
DVYELTKAQYIDKPPKGKHSTKGLGKKVPLESEFVKWRDDVVVPCGKPVDSKVRASELMY
NEYIVYNTAQVKMQFLLKVRFITRGETLFHGS
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccctccgaagccatggaaagcagagtatgccaagtcatcaagatcgtcatgc
aaaacctgcaagcgttccatcgacaaggagactctcaggcttgggaagatggtccaggcc
tctcagtttgacggtttcatgcctatgtggaaccatgcttcttgcatcctaaggaaagcg
aaacagataaaactggttgatgatgtggaaggtttggagtcgcttcgctgggatgatcag
cagaggataaggaagtatgttgaagatgcagttgtatcgagctccactgctgttcagaat
gtagagtgtggtgttgatgtttccccatcggctcgtgctacttgccgcagctgcaaagag
aagattgcaaagggagagcttcggatatcgaccaagcctcaaggtgccagaacattgtcc
tggaaccatgctaagtgttacctggacacgacatcagatccccaactggagaagttttcc
ggattggacagtcttacagcttcagaccgagctacacttcagtcgcttgtgaagaaacct
tctgcacctggaggcacaaaactggagcatgatgataaggggggtctccaacaggcagaa
gccaaaggtggggccaagaggaaaagagcccttgagagtgatgatgctcctctaagcaag
acctcatcttccaagaatactaaagacttgaaagatgaaaaacctgccctggaaaaccag
ttggagatgcaaagtaagagcctctgggcccttaaagatgatctcaaaaagcatgttact
acatcagagttgaaagagatgctagaagtcaatgagcaagattcaaaaggatcggaactt
gacttgcgcgcacgctggtttgagctctttttcctaattgctgatggaatgttttttgga
gcacttgcaaaatgccctatttgttctggatgcctccattattcctccggaatgtataga
tgctctgggtatttatcagagtggagcaagtgctcctatgcttcgcacgaacctcaacgt
attaaggggaagtggaagatacctgaagaaacaagcaatgatcatcttgttaggtggttt
aagtcacaaaaagtgaagaaaccagaaagagtgcttcctccaaagtcccccggtggacca
tcaggcagtcaatttgctagtgggcttagtccatcctccaaggttgaaaatattggagat
ttgaaggttgccattgctggagtacctgataaatcggtggaggagtggaaaaacaaaatt
gaaggatcaggtggacaagttcatatgaagattaagaaagaaaccaattgcctagttgtc
tctggtatgctggataacactgccgctgaggtaaaaaaggcaaggaggatgaagttaccg
attgtgagggaagattatctagttgattgcattaaaagacagaagaaacttccttttgac
tcataccgagtcgaagcaattgagaagactcatagcatggctactatcaaggtgaaaggg
caaagtgctgtgcatatgcaatctggcttacaagattctgggcacattcttgaggatgga
aagagtatctataatacaacattgaatatgtctgatttatcaactggtgttaatagttac
tacattcttcaagtcattcaagatgacaaaagctccgactgtttcgtgttccggaaatgg
ggcagagttgggaacgagaagattggcggaaacaagctggaagaaatgcataaatccgac
gcaattcaagaattcaaacggttatttctggagaagactgggaatacatgggagtcgtgg
gagagaaaagaagattttcacaagcaacctggcagattctttccattagatattgattat
ggagtaaaagactcatctaagaagaaacagcttgatttcacaagcagcaaacttgcacct
cagttggtggaattgatgaagatgcttttcaatgtggaggcatacagggaagctatgatg
gaatttgagattaatttgtctgaaatgccgctggggaaactaagtaaaagcaatatccaa
aaaggttttgaggcgttaacacagatccaaaatttgttaaagaacaatgattatgatcct
acagtgaaggagagccttatagttgatgctagcaacaaatttttcactgttattccttca
atccatccgcatgttattaaggacgaggatgactttaaactaaaggtgaagatgctggaa
gcactccaggatattgaaatagcttcaaaactggttggttttgatgccaatactgatgaa
tccattgatgagaagtacgagaaactacgctgccatgtttctccactttcacatgacagt
gaagagttccgactgattaagaagtatctgcagactacacatgctcctactcacacagaa
tgggcacttgaattggaggaagtattttctcttgaaagacaaggagaaatggacaagtat
gctccttatcgatcaaaactcaaaaacaagatgcttctctggcatggatcacgattgacc
aacttcgttggtatccttagccaaggattacgaattgcgcctcccgaagccccagcaact
ggctatatgttcgggaagggagtttactttgccgacctggtcagtaaaagtgctcaatac
tgtttcaccgacaggaaaaatcccgtgggactgatgcttctcagtgaagttgccttgggc
gacgtttatgagctaacaaaggcacagtatatcgacaaacctcctaaaggaaagcactct
actaagggccttggcaagaaagtgcctttagaatcagaatttgtgaaatggagggatgat
gttgttgtaccttgtggaaaaccagtggattcgaaagtgagggcgtcagagcttatgtac
aatgaatatatcgtctataatacggctcaagttaagatgcagttcttactgaaagtgagg
ttcatcacaagaggtgagaccttatttcatggtagttag
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