Salvia hispanica (chia): 125223483
Help
Entry
125223483 CDS
T09851
Name
(RefSeq) extensin-like
KO
K13095
splicing factor 1
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125223483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125223483
Spliceosome [BR:
shis03041
]
Complex A
Other components
Complex A specific factors
125223483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
125223483
NCBI-ProteinID:
XP_047982614
LinkDB
All DBs
Position
4:45849333..45853929
Genome browser
AA seq
786 aa
AA seq
DB search
MVTEVGHASTDIQTTVTAPPPTASTSGPKTSMFAKRSGFVIPKNKLSGSLVPVFRGSKKR
DADMINEEATKKVQRKTKWGPDLTMDTTVRKGRALAYQTRIDQISQLLTFGVLELEHSED
SFATSESHHWKTSEHQLSREESEQLEFEKREIIGEILKLNPAFKPPTDYKPLLKEAKVTI
PINEHPNYNFIGLVFGPLSDTQKRLEKETGTKIQVYGTKADAGGPVEITSDEKEIDNAYE
DMYVNIAADTHEKVDSAVALIELLITSVSMKPVSSSTTSTVALADNTNTNQTQSILTSTV
TPALTNQGTPQLFPGSLPLPQGQFPQYPQTWFPVGPTQAPTYRHSGFVNPSNASAAFLNN
TGQVSSSPLNHSNVPTLFGPRPVIPASFSPVPQNPSAPTSGTQSTYLQQPPSHAQTGGPQ
PPYMHQAPPSTGWPGPPHNLPLTSRPPFSASESSRWLPSPVSTSASQGPANIMQGPPVNH
PNDMISPLSTGAQSSRPVANQQSLGFSPMLPSAGPESTPSSMGSLQPAMPQMAMRPPPSN
AVPGSAPMPFPTQSSGSLPQPGMPNSYPGNAANIDSIRPVPGTIPRPQQPSSGDFTFQPH
RPPSAVSQVWHTNQSVPQNIRHPVQAGQTSLPPHSPHMRPMLNNMNLHGFPRPPASHQMN
QPRPHAPTNFAGNSTVPVPPRHQMMPGHNAGVPNMPPRNFAPHPISNTLGPFPPRLENHL
ARPPRFPTPHQHFGNPPRRPFPSHQVYDPFVPTAAPFNSQSSSNAARMPSESDPEYEDLM
ASVGVK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggtcacagaggttgggcatgcttcaacagatattcagacgactgtaacagctcctcca
cccactgcatcgacaagcggcccaaagacgtctatgtttgcaaaaagatcaggatttgtt
attccaaagaacaagctatcaggttcattggttcctgtgtttagaggatctaaaaagaga
gatgctgatatgatcaatgaggaagctactaagaaagtgcagaggaaaaccaaatggggg
cctgatctaaccatggataccactgtcaggaaagggagagccttggcatatcagactcgg
attgatcaaatatctcaattactgacttttggggtgctggaacttgagcatagtgaagat
tcatttgctacatcagaatctcaccattggaagacatcagaacatcagcttagccgtgag
gaatcggaacagctggaatttgaaaagcgtgaaattataggtgaaatactaaaattaaat
ccagcattcaagcctcctaccgattacaaacctctgctgaaagaggcaaaagttacaatt
cccattaatgaacatccaaattacaatttcattggtttagtatttggcccgttaagtgat
actcaaaagcgactggagaaggaaacaggaaccaaaattcaagtttatggcacaaaggcg
gatgcaggaggaccggttgaaattacttctgatgagaaagaaatagacaatgcttatgaa
gatatgtatgtaaacatagcagcagacacacatgagaaagttgattctgcagtggcttta
attgaactgttaatcacctcagtttcgatgaaaccggtgtcttcttcaacaacatcaact
gtagctcttgctgataatacgaatactaatcaaactcagagcatactgacttctactgtg
acacctgcgctgacgaaccaaggaacgcctcagctatttcctggttctttaccgcttcct
caaggccagtttccacaatatcctcaaacctggtttcctgtaggtccaactcaagctcca
acttatcggcactctggatttgtcaacccttcaaatgcttctgcagcatttctcaataac
actggccaggtatcttcctcgcccttgaatcactcaaacgtgcccacattgtttggtcca
cgaccagtcatccctgcaagttttagtccggtcccgcaaaatccttcagcccctacatct
ggaactcagtccacctatctgcaacagccaccctcacatgctcaaactggtggacctcag
cccccatacatgcaccaggcacccccatcaaccgggtggcccggacctccccacaacctt
ccactaacatccaggccacctttctctgctagtgaatcctccagatggttaccttcaccg
gtgagcacttcagcatctcaaggtccagccaacattatgcaaggaccaccagtgaatcac
cccaatgatatgatttcgcctctatctactggagcccaatcatccaggccagtagctaac
caacaatcactaggcttctctcccatgctgccatcagcaggacctgaatccacaccttca
tcaatgggatctctacagcctgctatgccccaaatggcaatgcgtccaccaccctcaaat
gctgtaccgggatctgcacctatgcctttcccgacgcaatcttcaggatcacttccacag
cctggaatgcccaattcttatccgggtaatgctgcaaatatcgattccataagacctgtt
ccggggacaattccaagacctcagcaaccgagttctggtgattttacttttcagcctcac
cgcccgcccagtgcagtttctcaggtttggcataccaatcaatctgttccacagaatata
agacatccagttcaagcaggccagacatctttaccacctcactctccacatatgaggcct
atgttgaacaacatgaatctgcatggttttccaaggcctccggctagtcatcagatgaat
caacctaggccacatgctcctaccaactttgctggaaactctacagttcccgttccacct
agacatcagatgatgccaggtcataatgccggagtcccaaatatgccaccgaggaacttt
gctccacatcctatcagtaacactctcggtccttttccacctaggctggaaaaccatctt
gctcgcccaccacggttcccaactccacatcagcattttggaaaccctccaagaaggccg
tttcctagccatcaagtatatgatccttttgttccgactgctgctcctttcaactctcaa
agtagtagtaatgcagcaaggatgcccagtgagagtgatccagagtatgaggacctcatg
gcttctgtaggagttaaatga
DBGET
integrated database retrieval system
