Salvia hispanica (chia): 125223721
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Entry
125223721 CDS
T09851
Name
(RefSeq) F-box/LRR-repeat protein 3-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125223721
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125223721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_NXF1-5
LRR_At1g61320_AtMIF1
F-box-like
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
125223721
NCBI-ProteinID:
XP_047982947
LinkDB
All DBs
Position
4:complement(39547110..39550310)
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AA seq
662 aa
AA seq
DB search
MKNKKESSFTRFDLLSEEIVFTILDFLHQNPGDIKSFSLVCTSFHAIESRHRRFLKPLRS
EHFPKLFARYRHISNLDLSLCPRITDASLGAIAAGCKEALRSIDLSRSSFFSHAGLSNLV
ANCSNLVEIDLSNAAELRDTAAAAVAEARNLERLWLVRCKSITDIGIGCIAVGCRKLRLL
SLKWCLGIGDLGVGLIAVKCKGLRSLDLSYLPITNKCLSQILELQHLEDLVLEGCFGIDD
DRLTAPKLGCKSLETLDMSSCQNVSYVGLTSLTSAVGSLRQLILSYGSRVDLALANSLQS
LSTLQCIKLDGCQVTCSGLKAIGNLCISLKELSLSKCTGVTDEGLSSLVTKHKDLQKLDI
TCCRKITHVSLAHITNSCTSLVSLKMESCTSVSAEAFVLIGQRCQLLEELDLTDNEIDDE
GLKSISSCSQLSSIKLGICLNITDEGATHIGISCSKLKEIDLYRSAGITDSSILAISRGC
PDLEMINVAYCTSISDTSFIAMSKCTKLSTLESRGCPLVTSLGLAAIAVGCKQLTRLDIK
KCVNIDDGGMIPLSHFSQNLKQINLSYTNVTDLGLLSLARISCLQSMTLLHQEGVTPAGL
AAALLACSGLTKVKLQASFKSLLPPWLFEHLEARGCSLLWREKVFQAELDPKCWKLPLVD
LE
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaaaaaagaatccagcttcacccgcttcgatctcctatccgaagaaatagtc
ttcacaatcctcgatttcctccaccaaaaccctggcgatatcaagtcattttctctcgtt
tgtacctcattccacgcaatcgagtctcgccacaggagattcctcaaacccctccgctcc
gagcattttcccaagctcttcgccagatatcgccatatctcaaatctcgatctctccctg
tgtccgaggataaccgacgcctccctgggcgcgattgccgccggctgtaaggaggcgttg
aggtcgattgacctctctaggtcgagcttcttctcccacgcggggttatcgaatctggtt
gcgaattgctccaatttggttgagattgatctgtcgaatgcggcggagctcagggacacg
gcggcggcggcggtggcggaggccaggaatctggagaggctgtggctggtgaggtgtaaa
tcgattacggatattgggattgggtgtattgctgtggggtgccggaaattgaggctgctt
agcttgaaatggtgtttagggattggggatttgggggtgggattgattgctgtgaaatgc
aagggtttgaggagtttggatctctcttacttgccgatcaccaataaatgtttgtcacaa
atattagagttgcaacaccttgaagatctcgttcttgaaggatgtttcgggattgatgat
gacagactcacagctccgaagctaggatgcaaatcattggagacgcttgatatgtcgagc
tgtcagaatgtgagctatgtcggtttgacttctctaaccagcgctgttggaagtctcagg
caactcatcttatcatatggctctcgtgtggatcttgctcttgctaatagtttgcagagc
ctctcgacgttacaatgtataaaacttgatggttgccaggtcacttgctcggggctcaag
gccattggaaacttgtgcatctccttgaaggaactgagcctcagtaaatgtaccggggtg
acagatgaagggctttcctcactcgtaactaagcataaagacttgcagaagctggacatc
acctgctgccgcaagataactcacgtctcgcttgcccacatcacgaattcttgcacctcc
ctcgtctctctaaagatggaatcatgcacctcggtctctgctgaagctttcgtcttgata
gggcagcggtgccagcttcttgaggagcttgacctcactgacaatgaaatagatgatgaa
ggcctcaagtccatctcaagttgctcacagctctcgagcattaagcttgggatctgcctg
aatataacggacgagggtgcaacacacattggcatttcgtgttcaaagctcaaagagata
gacttatacagatcagctgggattacggattcaagtattctagccatttctcgtggctgc
cccgaccttgaaatgatcaacgtagcctattgcacgtccatatccgatacctcgtttatc
gccatgtcaaaatgcacaaagttgagcacattagagagtcgaggatgcccccttgtcacg
tcgttgggcctagccgccatcgccgtcggatgcaagcaactcacccgattagacatcaag
aagtgtgtgaacatagacgatggtggaatgattcctctatctcatttctctcagaatctc
aagcagataaatttgtcctataccaacgtcacggacttggggctcttgtcactcgcgagg
atcagctgcctgcagagcatgaccctcctccaccaagagggggtgactccagctggacta
gccgctgcactcttggcgtgcagcgggctaacaaaagtgaagcttcaggcatcgttcaag
tcactgttgccaccttggctctttgaacatttggaggcccgcggctgctctctcctgtgg
agagaaaaggtatttcaggctgaattggatcctaagtgttggaaactgccgttggtggat
ttggaatag
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