Salvia hispanica (chia): 125223727
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Entry
125223727 CDS
T09851
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125223727
03012 Translation factors [BR:
shis03012
]
125223727
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125223727
mRNA cycle factors
Stress granule specific factors
125223727
Translation factors [BR:
shis03012
]
Eukaryotic type
Initiation factors
eIF-4
125223727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
125223727
NCBI-ProteinID:
XP_047982956
LinkDB
All DBs
Position
4:complement(31634333..31642759)
Genome browser
AA seq
1740 aa
AA seq
DB search
MSHNQSRAERSESTQYRKTGRSGSSNQQRQFQGSASSKGGGGAPFNSANRSYNKKYNNNA
QGGQSRVRGPNVDSDSAGHAFHNSPQEQLPSHISSISNNVKLTDAPAHKITQVVPRSPSS
DVSNAAPTPNVSAANPESGQPKTPTQEDAPGSFSLQFGSISLTPSAINVVQIPARTSSAP
PNLDEQKKDQARQNLLRAGPVPIPIPKQPVVKKDAGVPNQTNAREAHSISKPKRDIQVSV
VPPVTQIQKPGVHSMPGMPMQMPFHQTQVQFGGPNPQIQPQALSGTPLPLSMQMPLPIGN
PQMQQQMFISSLQPHPLQSQAMMQGQNFNFPPQMAHQLPPQLGNMGINMTPQFPQHQAGK
YGASRKTVKITHPDTHEELRLDGSPAPRSHPVVPPQSQPIPSFPQNHQMNFYPNSYNTNT
VYFPTASTIPLSSTQIPPTSQPPRFHNQVTVKPPLGIHGEKEPLIATSSVSVRKAESSEP
SALSGEDSVRPQKEVESSSLISVPHSKPGLGVSSTSAASSDSINVESDACNNATPALVHM
DGSASILKSSANESINKVAVPVPLKDIPNEPLNLGQQDQVGKQLSSLSSPTSHSLEPEAV
NTKSTLPRTNLACETSKESVSTNIATSEASDFTGENIEPDSVNSRQSEPEITVEMEGKAT
SQSLEFDKDSLDTSLKSLSLESPKVTGEVEESIGTKITSHTSGLLEGTEEKPEESLGCRS
DDVNMAVNYVESSHTEGGQNADNPVSVDGLSAQDDKTSIADTECLDDSSKPDIEDIDNNS
DSLVSTSSSVKDKVLLDASVSKTALPRGKKKKRELYRKAEAAGTISDLYMAYKGPEDKKD
AVTSAESTEETSSNNKIKQISSEISKENDLSNEKPPLTKVEPDDWEDAAEISPQLESKNV
NQGSDVDENGLMTKRYSRDFLLKFVEQCTDLPAGFDISSEVADALMVSNVNIRESHPSPG
RNFDRASGGSRLDRRASGHGDEDKWNKFPGPLMSGRGDMRADIVYANNASFRPGQVSNYG
VLRNTRPQTPNQHAGGILSGPMQSLGPQGVLLRNNSDADRWQRGTGFQKGLMPPPQTPPP
IMHRAEKRYEVGKVTDEEEAKQRQLKGILNKLTPQNFEKLFQQVQQVNIDNVVTLSGVIS
QIFDKALMEPTFCEMYADFCFHLAAGLPELSVDNEKITFKRLLLNKCQEEFERGEREEQE
ANETGEGESKQTEEEREEKRLRVRRRMLGNIRLIGELYKKRMLTERIMHECIGKLLGQQT
QHQNPDEENIEALCKLMSTIGVMIDHPKAKDHMDAYFLIMTQLSNNTKLSSRVRFMLRDS
IDLRKNKWQQRRKVEGPKKIEDVHRDAAQERQAQTSRLGRVSSIGGSNRRGPSMDFAPRT
PNMLSPPGSQISSFRPGGPQLRGHGSQDARTDERHSYENRTMSIPLPQRPLGDASITLGP
QGGLVRGMAYGGQPSASSSRLAEISSPGDARRVGPGLNGFSSIPERMAYGQREDPVPRYA
SDRFIVPSSYDQERNVTHGNRNKDRIDESLPTSPPARDAPQTSTENTWPEEHLRGKSMIT
IKEFYSARDESEVAMCIKDLNAPGFYPSMISIWLVDSFERKDVERELLTKLLINLTKSQD
GLLSQTQLVRGFESVLAVLEDAVNDAPRAAEFLGRFFARVVLEKVVSLSEIGRLVYEGGE
EQGSLVEAGIAADVVGTILDTIKSEKGDSVLNEIRSSSNLQLQNFRPPGSNRPCRIDKFM
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgtcccataatcaatcaagggcggagaggagcgagtccacgcagtacaggaaaaccggc
cgatccggtagctccaatcagcagcgtcagttccaaggcagcgcctccagtaagggcggt
ggcggcgccccattcaattctgccaaccgcagttataataagaagtataacaacaatgcc
caaggtggtcagtcgagggtaagaggtccgaatgtggattcagattctgctgggcatgct
ttccataatagtccccaagaacagctgccaagtcatattagcagtatatcgaacaatgtc
aagctgacagatgctcccgctcacaaaatcactcaagtcgttcccagatctccatcttct
gatgtttcaaatgcagctccaacacctaatgtttctgctgcaaatccggagtctgggcag
cctaaaacacctacacaagaagatgcaccagggtcattttccctgcagtttggttccatt
tccttaactcctagtgctatcaatgtagtgcagatacctgctagaacaagctcagcacca
ccaaatttggatgagcagaaaaaggatcaggctcgacaaaacttattaagggctggtcct
gtgccgattcccatacccaagcaaccagttgtgaaaaaggatgcaggtgttcccaaccaa
acaaatgctcgcgaagctcactcaatttccaaacctaagagggacattcaggtgtcagtt
gtaccacctgtaactcaaatccagaagccaggtgtacattctatgcctggtatgcccatg
caaatgccatttcaccagacacaggttcagtttggtggtcctaatccacaaattcagcct
caagccttgtcagggacaccattgcctctgtcaatgcagatgccgcttcctatagggaat
cctcaaatgcagcagcaaatgtttatttcaagtctccagccacatccactgcagtctcaa
gcaatgatgcaaggacagaactttaactttccaccacagatggctcatcagctacctcct
cagttgggtaacatgggaattaatatgacccctcagtttcctcagcatcaggctggaaaa
tatggtgcttctaggaaaactgtgaagattacacacccagacactcatgaagagttgagg
ctggatggttcgcctgctcctagatcacatcctgttgtgccacctcagtcacagcctatc
ccatcatttcctcaaaatcaccagatgaatttttatcctaattcttataacacaaacact
gtctattttcctactgctagcactattccattgagcagcacccagattccacccacttct
caaccaccaaggtttcacaatcaggtgacagtgaaaccacctcttggcattcatggggag
aaagagccattgatagctacaagttcagtttctgtcagaaaggcagagtcttcagaacca
tcagctttatctggagaggattctgttcgtccacaaaaggaagttgaatcatcatctctg
atctctgttccacattcgaagcctggtttaggagtgtcgtctacatctgctgcatcatca
gattctatcaatgtggaaagtgatgcatgcaacaatgcaactcctgctttagttcatatg
gatggttctgcatctatattaaaaagttctgccaatgaatcaataaataaagtagctgtt
ccagttccactcaaagatatacctaatgaaccactcaatctaggccagcaggatcaggtt
ggcaagcaactgtcatcgctatcaagtccgacttctcattccttggaacctgaagctgtt
aacacaaaatctacattgcctagaactaatttggcatgcgaaacttccaaggaatcagta
tcaactaatatagctacatctgaggcatctgattttacaggtgagaatatcgaacccgat
agtgtaaatagtagacaatcagagcctgagataactgtggaaatggaaggaaaagctaca
tctcagagtttggaatttgataaagatagtttggacacatcattgaagtcactttcgtta
gaatcaccaaaagtaactggtgaagttgaggagagcattggaacaaaaatcacatctcac
acaagtggtctattggagggtacagaggagaagcctgaagagtctttaggttgtcgtagt
gatgatgtaaacatggctgttaattatgttgaatcttcccatacagaaggtggtcaaaat
gctgataatcctgtgtcagtggatggtttatctgcacaagatgataagacttctatagca
gacacagaatgtcttgatgattcatcaaaacctgatatcgaagatattgacaataatagt
gatagtttagtctcaacttcctcaagtgtcaaggataaagtcttgttagatgcaagtgtg
tctaaaactgctctacccagagggaagaagaaaaagagagaattatataggaaagcagaa
gctgctggtacaatttctgatctttatatggcatacaagggtcctgaggacaagaaagat
gctgtgacctctgcagagagcactgaagaaacttcaagcaacaataagataaagcagata
tcctctgaaatctctaaagagaatgacctgtcaaatgagaaacctcctctgactaaagtt
gagccagatgattgggaagatgctgctgaaatttctccgcagttagaaagtaagaatgta
aatcaaggttctgatgtagatgaaaatggattgatgactaagcgatattctcgagatttc
ctccttaaattcgtagaacaatgcactgatcttccagccggttttgatattagttcagaa
gtagcagatgcattgatggtttccaatgtgaatatacgtgagtcacatcctagtcctgga
cgcaactttgacagggcgtctggaggttcaagactagatcgtcgtgctagtggccatgga
gatgaggataaatggaacaaatttccaggcccacttatgtcagggcgaggagatatgcgg
gcggatattgtatatgcaaacaatgctagtttccggcctggtcaagtcagtaattatggt
gttctaaggaatacacggcctcaaacacccaatcagcatgctgggggcatcctctctggg
ccaatgcagtcccttggccctcagggagtattgctaagaaataactccgacgcggataga
tggcagcggggaactggttttcagaaaggtttgatgcctcctcctcagacaccaccccca
attatgcaccgagcagagaagaggtatgaagtaggtaaggttactgacgaggaagaagca
aaacagaggcagttgaagggcatattgaacaaacttacacctcaaaattttgagaaactg
ttccagcaagttcagcaagtcaacattgataatgttgttacactgtctggggtgatctct
cagatttttgataaagctctgatggagcctaccttctgtgagatgtatgccgacttctgc
tttcaccttgctgcgggcttgcctgaattgagcgtggataatgaaaaaatcactttcaag
agattactccttaacaaatgccaggaagaattcgagagaggagaaagggaggaacaagaa
gcaaatgaaactggtgaaggtgaaagtaaacagacagaagaagagagagaagagaagaga
ctgcgtgttaggagacgaatgttgggtaatattagattaattggagaattgtacaagaag
aggatgttgactgaaagaataatgcacgagtgcattggtaaattgttgggtcagcagact
cagcaccagaatcctgatgaagaaaacatagaagctctatgcaaattaatgagcacaatt
ggtgtaatgatagaccaccccaaagcaaaggaccacatggatgcttattttctcatcatg
acacaactgtccaataatacgaagctgtcttcccgggtaagattcatgctaagagattct
attgatctgagaaagaataagtggcagcagcggaggaaagttgaaggtccgaaaaagatt
gaggacgtacacagagatgctgcacaagaacggcaagctcaaactagcaggcttggccgt
gtttccagcattggtggttcaaacagaaggggcccgtctatggattttgctcctagaact
cctaatatgttatctcctccaggttcacaaatcagcagttttcgtcctggcgggccacag
ctacgtggccatggctctcaggatgctcggacggatgagagacattcctatgagaacagg
acgatgtctattcctctgcctcaaagacctcttggtgatgcttccataacacttgggcca
caaggtggtcttgtccggggaatggcatatggtggtcagccatctgcttctagctctcgt
ttggctgagatatcaagtcctggagatgcacgaagggtgggccctggtctaaatggattc
agttctattccagaacggatggcttatggccaaagagaggatcccgtgccaagatatgcg
tcggacaggtttattgttccttccagttatgaccaagaacggaatgttacacatgggaat
agaaacaaagatcgcattgatgaatccctgcctacttctccacctgctcgtgatgcgccc
caaactagcacagaaaatacatggcccgaagaacacttgcggggaaaatcgatgatcact
attaaagaattctacagtgcaagggatgagagtgaagttgcaatgtgcatcaaggatttg
aatgcccctggcttctatccctcaatgatatctatctggcttgttgattcatttgagagg
aaagacgtggagagggagctcttgacaaagcttcttatcaaccttacaaaatctcaagat
ggcttgctaagtcagactcaactcgtcagagggtttgaatctgtcctagctgtcttggag
gacgccgtcaatgatgccccgagagcagctgagttccttggtcgttttttcgcaagagtt
gtcttagagaaggttgtctcactttctgaaatcgggcggttggtatacgaaggtggagaa
gagcaagggagccttgtagaagcagggattgcagctgatgtggtgggaaccatcttggac
acaatcaaatcagagaaaggtgattctgtgctgaatgagattcgttcaagctcgaatctg
cagctacagaacttcagacctccaggctctaacaggccgtgcaggatagataagtttatg
tag
DBGET
integrated database retrieval system
