Salvia hispanica (chia): 125223782
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Entry
125223782 CDS
T09851
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00900
Terpenoid backbone biosynthesis
shis01100
Metabolic pathways
shis01110
Biosynthesis of secondary metabolites
Module
shis_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125223782
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
shis01006
]
125223782
Enzymes [BR:
shis01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
125223782
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
125223782
2.5.1.29 geranylgeranyl diphosphate synthase
125223782
Prenyltransferases [BR:
shis01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
125223782
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Terpene_synth_C
UbiA
Motif
Other DBs
NCBI-GeneID:
125223782
NCBI-ProteinID:
XP_047983034
LinkDB
All DBs
Position
4:17553997..17555537
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AA seq
365 aa
AA seq
DB search
MMSMNLVDAWAQNLSFSKQPFPSKSPIGFIHHPKFEPLFLKSRRPISSLGVSAVLTGEEA
RVSTRRDDAAPFDFNAYVVDKANHVNKALDDAVVVGNPPMIHDAMRYSLLAGGKRVRPML
CIAACDIVGGAQAAAIPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGENVAV
LAGDALLAYAFEFMAKATVGVAAERILAAVGELAKAIGTEGLVAGQVVDLHFTGDANVGL
DTLEYIHIHKTAALLEASVVLGAIMGGGSSEQIEKLRTFARKIGLLFQVVDDILDVTKSS
EELGKTAGKDLATDKTTYPKLLGLEKAIEFAEQLNEEAKAQLDGFNPSKAAPLLALADYI
AHRQN
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctatgaatctggtcgatgcgtgggcccagaatctctccttctccaagcagcca
ttcccctccaaatcccccatcggattcatccaccaccccaaattcgaacctcttttcctc
aaatcgcgcaggcctatctcctccctcggcgtctccgccgtcctcaccggcgaggaggcc
agggtctccacgcgcagagacgacgccgcgcccttcgatttcaacgcctacgtcgtcgac
aaggccaaccacgtcaacaaggcgctcgacgacgccgtcgtcgtcgggaatccgccgatg
atccacgacgcgatgcgctactccctcctcgccggcggcaagcgcgtccgccccatgctc
tgcatcgccgcctgcgacatcgtcggcggcgctcaggccgcggccatccccgccgcctgc
gccgtcgagatgatccacaccatgtcgctcatccacgacgatctcccctgtatggacaat
gacgacctccgccgcggcaagcctaccaatcacaaggtcttcggcgagaacgtcgccgtg
cttgcaggcgatgctctgttggcgtacgcgtttgaattcatggcgaaggcgacggtaggg
gtggcggcggagaggatactggcggcggtgggagagctggcgaaggcgatcgggacggag
gggctggtggcggggcaggtggtggatctgcacttcaccggcgacgcaaatgtagggtta
gacacattggaatacatccacattcacaaaactgcagcattattagaagcatcggtagtt
ttgggggcaatcatgggaggcggaagcagcgaacaaatcgagaaattgagaacatttgct
aggaaaatcggtctccttttccaagttgtggatgacattttggatgtgacaaagtcgtcg
gaggagctggggaagacggccgggaaggacttggccaccgacaagactacgtatccgaag
ctgctggggctggagaaggccattgagtttgcggagcagctcaacgaggaggcgaaggcg
cagctggatggcttcaacccgagcaaggcggccccgttgttggcgctggccgattacatt
gctcataggcagaactaa
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