Salvia hispanica (chia): 125223808
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Entry
125223808 CDS
T09851
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125223808
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125223808
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125223808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
CALCOCO1
zf-C3HC4
CT398_CC
Asd-4
TPR_MLP1_2
zf-C3HC4_4
Bet_v_1
RNase_Y_N
zf-RING_11
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
125223808
NCBI-ProteinID:
XP_047983059
LinkDB
All DBs
Position
4:complement(36902344..36907018)
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AA seq
615 aa
AA seq
DB search
MEAMAGHAIEMLTTSDRDDEERDGDDVAGITITTPAHLINDNHGNEFVIVDDTPSEDGGD
DAAEPERECSSPEKGVSCNKGVSTALVKGDGDGDDDGLLGEFNRGEIDGLFCPICLEAWT
SGGDHHACCLPCGHIYGLSCIKKWLCRQGSHKCPHCKKKCRIKDIRLLYATRLVAIDGHL
QKRAQSFEAKCSSLEKKSADWGKKEIEWKKREADLRKEVQYLKERTSDLEDLLEDMERRA
SGSSASNSNYPRGVDSIPSFHSGGSHKFEMQMDIQIQGARLFGVDSSNKILVFARRLSGM
GGGNVLTKVSLIFDHEREDIHLAENTKAVKDLKVSPHGGLVLLASLGKKLSVLSTQSNNT
VITYDLPASAWSCSWDICNSHYFYAGLQNGTVLQFDMRQTAKHVGSLTGLSDKLVHTIHS
LQSDSSCGSGGRSILTASALGLCQLNFGGSEEGSYLIPESDKQGVCVSLAGSNYSDYITA
SFRPKIEVPWEMGVSQPVLNAAGQATMGNHIVYTKMGAAYQKVGASYGNVSDIRMPIRCA
IVDRVYQNPVFACVDELRSEVVIQELPSLMVLERLKPQDTPIYDVKYSSISSSGLIGCLS
DNSFRLYSARLLINP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggaggcaatggcaggccacgcaattgaaatgctaacaacatccgatcgcgatgacgag
gagcgggatggagatgacgtggccggaattaccattacgacgccggctcacttgatcaac
gacaatcatgggaacgaatttgtgattgttgacgatacgccctctgaggatggcggtgat
gatgctgccgagcctgaacgtgaatgcagcagtccggagaagggcgtcagttgcaataaa
ggggtttcgacggcgttggtaaagggtgatggtgatggtgatgatgatggattgttggga
gagttcaataggggcgaaattgatggcctcttttgccccatttgccttgaggcttggacc
tctggtggagaccaccatgcctgttgtttgccatgtgggcacatatatgggttatcgtgc
atcaagaaatggttgtgtcgtcaaggctcgcacaagtgtccgcattgtaaaaagaaatgc
aggataaaggacattaggcttctttatgcaactcggcttgttgctattgatggacatctt
caaaagagagcacaatcatttgaagctaaatgttcgtcccttgagaaaaagagtgctgac
tggggcaaaaaggaaatagaatggaagaagagagaagctgatctgcgcaaggaagtgcaa
tatctcaaagagaggacttctgacttagaggatcttttggaagatatggaacgcagggca
tctgggtcatctgcatcaaattcgaattatccaagaggagttgattccatccctagtttc
cacagtggaggatctcataaatttgaaatgcagatggacattcagatacaaggtgcccgc
ctctttggtgtagattcttccaataaaattttagtatttgctcgaaggctttcaggaatg
gggggaggcaatgtgctgaccaaagtgagcttgatttttgaccacgaaagggaggacatt
catcttgctgagaacaccaaagctgttaaggatctaaaggtttcccctcatggtggactt
gtgctgttagcatccctaggaaagaaactatcagttcttagcacacaaagcaacaacact
gttattacgtatgatctaccggcttctgcctggtcatgctcttgggatatttgcaactca
cattatttttacgcaggcttgcagaatggcacagttttacagtttgacatgcgtcagact
gcgaaacatgtgggatccttaactggattgtcagacaagttagttcatacaatacattct
cttcagtccgattcatcttgcggttctggtggcagaagtatcctaactgcatccgcactt
ggcttatgccaattgaactttggtgggagtgaagaaggatcttatctgattcctgaatca
gataagcaaggagtttgtgtatctcttgctggttccaactacagtgattatatcacggcc
tcatttcgtccaaaaatcgaggtaccttgggagatgggagtttctcaaccggtgcttaat
gcagcggggcaagcaacaatgggaaatcatatcgtgtacacaaaaatgggtgcagcatac
caaaaggtgggagcaagctatggcaatgtgagtgatatcagaatgccgattagatgtgca
attgtggacagggtttaccagaatcctgtttttgcttgtgtggatgaactgaggtctgaa
gttgtaattcaagagttaccatctctaatggttttggagcgtcttaaaccacaagatacc
cctatttatgatgtcaagtatagcagcatatcaagttccggactaattggctgcttgagt
gacaactcctttcgcctatattctgcccgcctcctcatcaacccttag
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