Salvia hispanica (chia): 125223829
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Entry
125223829 CDS
T09851
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Module
shis_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125223829
Enzymes [BR:
shis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125223829
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
DUF7460
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125223829
NCBI-ProteinID:
XP_047983083
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Position
4:14566474..14568523
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AA seq
388 aa
AA seq
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MRILILSLFYYSSQLVLAANPTYNVQSYGAKSDGKSDCTKAFLSAWGAACATTAASTIYV
PPGRYLLRNAYFSGSLCKNTAITIRIDGTLVAPSDYNVIGNIGSWLKFERVTGVSIYGGT
LDGQGTKLWACKNSGNNCPKGATSLAFYNSNNIRINGLVSLNSQMFHILLDGCRNANLAN
VRVSAPGNSPNTDGIHIHQSSGVTIINSHIATGDDCVSIGPGASNLWIENLGCGPGHGIS
IGSLGWDMNEAGVKNVTVKTATFTGTENGVRVKTWARPSNGFVTNVVFQHLVMVNVQNPV
IIDQNYCPDHQACPHQGSGVKISNVRYEDIHGTSATQVAVKFDCSQTRPCSGIRLDDVNL
TFRDKPATASCSNAGGSADGVVNPTSCL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagaattcttattctgtcacttttttactactcttcacaattggttcttgcagccaat
cccacctacaatgtgcaatcctatggtgcaaaatccgatggaaaatccgattgcaccaag
gcctttctgagcgcttggggcgcagcgtgtgccaccacggccgcgtccaccatatatgtg
ccaccggggaggtacctcttgcgaaatgcgtatttcagtggcagtctgtgcaaaaacaca
gccataaccatacgtattgatgggactcttgtagctccctctgattacaatgtaattgga
aatattgggagctggttgaagtttgaaagggtcaccggagtttctatctatggaggaacc
ctagatggccaagggaccaaattgtgggcttgcaagaactccggcaacaactgccctaaa
ggcgctacctcattagcattctacaattcgaacaacatacggatcaacggtctagtgtcg
ttgaacagccaaatgttccacattctccttgatggatgccggaatgcaaatctggcgaac
gtgagagtatcagccccggggaacagccccaacaccgacgggattcacatacatcagtca
tctggtgttaccatcatcaattcacacatcgccacaggcgacgactgcgtctccatcggc
cctggcgcctccaacttatggattgagaacctcggctgcggccccggccacggaattagt
attggaagtctaggttgggatatgaacgaagccggagtgaaaaatgtgactgtaaaaaca
gctacatttaccggaaccgaaaatggtgtgagggtgaagacatgggcaaggcctagcaac
ggattcgttacaaatgttgtgtttcaacatctagtcatggttaatgtccaaaatcctgtt
atcattgaccagaattactgccccgaccaccaagcttgtccccatcagggttcgggtgtg
aaaattagcaatgtacgatatgaagatatacatggaacatccgcgacacaagttgcagta
aaattcgattgtagtcaaacgcggccttgcagtggaatcaggctggatgatgtgaacctc
accttcagagacaaaccagccaccgcgtcgtgttccaacgccggtggctctgctgatgga
gttgtcaaccctaccagctgtttataa
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