KEGG   Salvia hispanica (chia): 125224018
Entry
125224018         CDS       T09851                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
shis  Salvia hispanica (chia)
Pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125224018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shis03041]
    125224018
Spliceosome [BR:shis03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125224018
 Complex B
    125224018
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4 Tachystatin_B
Other DBs
NCBI-GeneID: 125224018
NCBI-ProteinID: XP_047983314
LinkDB
Position
4:complement(21711579..21712817)
AA seq 280 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GVDAQGQPIHPDKIQEHFEDFYKDIYEELSKFGEIESLNVCDNLADHMIGNVYVLFKEED
QAAAALNALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGREL
RRKLYGSRHGRFWGTRSRSRSVSPSHPSHPKRERERERDRERERDTDRRDHHRGSGRRSG
GGERHGSERRRRSRSPVREGSEERRARIEQWNREREEKGQ
NT seq 843 nt   +upstreamnt  +downstreamnt
atggcggagcacctggcctcaattttcggcaccgagaaagaccgcgtcaactgccccttc
tacttcaaaatcggcgcctgccgccacggcgaccggtgctcccgcctccacaaccgcccc
accatctccccgacgctcctcctctccaacatgtaccagcgccccgacatgatcaccccc
ggcgtcgacgcccagggccagccgatccaccccgataagatccaggagcatttcgaggat
ttctacaaggacatctacgaggagctcagcaaattcggcgaaatcgagagcctcaacgtc
tgcgacaacctcgccgaccacatgatcggaaacgtctacgttctgttcaaggaggaggat
caggcggcggctgcgctcaacgcgctgcaggggaggttctactccggccgtccgattatc
gccgatttctcaccggttactgattttcgcgaggcgacgtgccggcagtatgaggagaac
agctgtaaccgtggcggatactgcaattttatgcatgttaagatgatcgggagggagctg
aggaggaagctgtacggtagccgccatggccggttttggggaactaggagccgcagcagg
agtgtgagtccctctcatccctctcatcctaagcgcgagagggaaagggagagggatagg
gaaagagagagggatactgataggcgggatcaccaccgtggtagtgggaggaggagtggt
ggaggtgagcggcatgggagtgagaggagaaggaggagcaggagtccggtgagggaaggg
agcgaggagcgtagggctaggattgagcagtggaatcgggagagggaggagaaggggcag
tga

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