Salvia hispanica (chia): 125224064
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Entry
125224064 CDS
T09851
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125224064
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
125224064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
GMNC_CC
ABC_tran
PH_FT_C
AAA_27
Motif
Other DBs
NCBI-GeneID:
125224064
NCBI-ProteinID:
XP_047983367
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All DBs
Position
4:complement(15562315..15576430)
Genome browser
AA seq
1052 aa
AA seq
DB search
MVDEPTPKRPKISRGDDDYVPGNIIKIEICNFMTFSKLTCKPGSRLNLVIGPNGSGKSSL
VCAIALGLGGEPSILGRAKKIGAYVKRGEESGYIEISLRGKRKEEQITIMRKIDIHNKSE
WLLNGKVVGRKVISEVIAGFNIQVDNLTQFLPQDRVCEFAKLTPVQLLVETEKAVGDPRL
PVQHNNLIEKSKELKKCERAVESNRGSLNQLTAMNAELERDVERVRQREDLLAKADSMKK
KLPWLKYDMKKVKYQEAKKQEDDANLKLKEAAKDLNDLKVPIEKQREEKGKQDAKFKKMN
GLLDSNMKKRMHLMENYDRLGALIQGKFREVDDLKHHEKSRQQRLSKAKEDLATAETEYA
NLVPYEPPKDRMKQLSAQIVELEEAAKEIRYEKRENEKQINNHRTMLTQCMNRLKEMENV
NNKCLQALKNSGAEKIFGAYQWVQDHRAEFKREVYGPVLLEVNVTNRLHAGYLEGHVAHY
IWKAFITQDSEDRDLLVRNLRSFDVPVINYVMTGNHQSGSFQATDEMRKLGISSRLDQVF
EAPHAVKEVLISQFYLDQSYIGSKETDERADMVNELGIADLWTPENHYRWCRSRYGGHVS
TNVETVEQSRLLLCNLDVKEIEVVRSKQIELEDKISTIDVTLKSLQATLRQKEDEAAELQ
HEREKIVNIIQKEKRKWRDMEHFVNQKRIKLKSIESEDDPDAAIDKLTEQVKDLKVQRFQ
CIFELKNLLIDAVAYRRSVAENNMSSIELDAKIKDMESNAKQQEKLALQASLFLDHCKSA
SDNCRKELQDAKRYAESVAIITPELQQAFLEMPTTVEELEAAIQDTITQANGILFLNHNI
LEEYENRQRKIEALTNKQEADEKELKSLLDEIDALKGSWLPTLKSLVARINETFSCNFQE
MAVAGEVSLDEHGTDFDQYGILIKVKFRQTGQLQVLSAHHQSGGERSVSTILYLVSLQDL
TNCPFRVVDEINQGMDPINERKMFQQLVKAASRPNTPQCFLLTPKLLANLEYSDACSILT
VMNGPWIDQPSKVWSGGENWSSIRMQLENNCC
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggtggacgagccaacgcccaagaggcccaaaatttccaggggggatgatgactatgtc
cctggaaatattattaaaattgagatttgcaacttcatgaccttcagcaaactgacctgc
aagcctggttcacgcttaaatttggttattgggccaaatggctctggaaagagttctctc
gtatgtgccattgcacttggacttggaggtgaaccatcgattcttggaagggctaagaaa
attggagcttacgtgaaacgtggagaggaatctggatatattgagattagtttgagagga
aagaggaaggaagaacaaattaccattatgaggaaaattgatatccataacaaatctgag
tggctgttgaatggtaaagtggttgggagaaaggtgattagcgaagtaattgcaggattc
aatatccaagttgataatttgactcaatttctaccacaagacagagtttgtgagttcgcc
aagctgaccccagtacaactccttgtggagactgaaaaagctgttggcgatcctagatta
cctgttcagcataataatctcatcgagaagagtaaagagttgaagaaatgtgaacgagct
gttgagagcaatagagggtctttgaatcaactgacggctatgaatgctgaattagaaaga
gatgtcgaacgtgttcgccaaagagaagatctcttagcgaaggctgattctatgaagaaa
aagttaccatggttgaagtatgatatgaagaaggtaaaatatcaagaagccaaaaaacag
gaagatgatgcgaatctgaagctaaaagaagctgctaaggacctgaatgatcttaaagta
cctattgagaaacaaagagaggagaaaggaaagcaggatgctaaatttaaaaagatgaat
ggtttgctagatagtaatatgaagaagcgtatgcatcttatggaaaattatgaccgcttg
ggagctctgatccaagggaaatttcgtgaagtggatgatttgaagcatcatgaaaaatct
cgccaacaaagactctctaaagctaaagaagatctcgccactgcagagactgaatatgca
aatctcgttccgtatgaacccccgaaggataggatgaaacaattaagcgcacaaatcgtg
gagcttgaagaggctgctaaagagatcagatatgagaaaagggaaaatgagaagcagata
aacaatcatagaacgatgctgacgcagtgtatgaacaggttgaaagaaatggagaacgta
aacaataagtgtttgcaagcattaaagaattctggtgctgagaagatatttggggcttac
caatgggttcaggaccatcgtgccgagttcaaaagggaagtgtatggtcctgtattgctt
gaggtcaatgtaaccaatcggctgcatgcaggctacctagagggtcatgttgcccattac
atatggaaggcttttattactcaggactccgaggaccgtgatttactggttagaaaccta
aggtcctttgatgttcctgtaattaattacgtcatgactgggaaccaccagagtggctcc
ttccaggcaaccgatgagatgcgtaaacttggcatatcttccaggcttgatcaggtgttt
gaagctcctcatgctgtcaaagaagttttgatcagccaattttatttggatcaatcatat
attgggtcaaaagagaccgatgagagagctgatatggtaaatgaattgggaatcgcagac
ctgtggaccccagaaaatcattatcgttggtgcaggtcccgctacgggggtcatgtatct
acaaatgttgaaaccgtagaacagtctcgcctacttttatgcaatttggatgtgaaggaa
attgaggttgtaagatcgaagcaaatcgagctggaagataaaatttctactatagatgtt
actttaaaatctcttcaagctaccttaagacagaaagaagatgaagctgcggagcttcaa
catgaaagggagaagattgttaacatcattcaaaaggagaagaggaaatggagggacatg
gaacattttgtcaatcaaaaaagaataaagttgaagtcaatagaaagtgaggatgatcca
gatgctgccatagataagctcactgagcaggttaaagatttgaaggttcagcgcttccaa
tgtatatttgaacttaagaatttacttatagatgctgttgcttatcggagaagtgtcgct
gaaaataacatgagttccattgaacttgacgctaagattaaggacatggagtccaatgca
aagcaacaagagaagttagccttgcaagcatcgttattccttgaccactgtaaaagtgcc
tcagataattgccgaaaggagttgcaggatgccaagagatatgcagaatcagttgctatt
attacgcctgagcttcagcaggccttcctggagatgcctactactgttgaagaactggaa
gctgccatccaggatacgataactcaagcaaatggcattctgttccttaaccataatatt
ctggaggaatatgaaaaccgtcaaagaaaaattgaagcacttactaacaagcaagaggct
gatgaaaaggaattaaaaagcctgttagatgaaatcgatgctctgaagggaagttggctc
ccaacattgaaaagcctcgtggctcggattaatgaaacatttagttgtaatttccaagaa
atggctgttgcaggcgaagtatcattagatgaacatggcacagattttgatcaatatgga
atattgataaaagtgaaattcaggcaaactggacagctgcaagttttaagtgctcaccac
caatctggaggggagcgttctgtttcaaccattctctaccttgtttctttgcaagacctg
acaaactgcccatttagggtggttgatgagataaatcaaggcatggaccccataaatgag
aggaaaatgtttcagcaattggtgaaagcagccagcaggccaaacacaccgcagtgcttt
ctgctcacccctaaattgctggcaaacctagaatacagcgacgcatgcagcattctgact
gtgatgaacggtccttggatcgatcagccttcaaaagtgtggagtggtggtgaaaactgg
tcttcaatcagaatgcagttggagaataactgttgctaa
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