Salvia hispanica (chia): 125224223
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Entry
125224223 CDS
T09851
Name
(RefSeq) floral homeotic protein DEFICIENS-like
KO
K09264
MADS-box transcription factor, plant
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125224223
Transcription factors [BR:
shis03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
125224223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
TTC3_9th
Herpes_BLRF2
TetR_C_8
Vpu
DctP
DUF5854
Motif
Other DBs
NCBI-GeneID:
125224223
NCBI-ProteinID:
XP_047983545
LinkDB
All DBs
Position
4:complement(24598195..24599980)
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AA seq
232 aa
AA seq
DB search
MARGKIQIKKIENQTNRQVTYSKRRNGLFKKARELTVLCDAKISIIMISSTQKLHEYISP
IITTKQIFDEYQKTVTADLWSSHYEKMQEHLKKLKEINRNLIKEIRQRTGDSLNDLGYEQ
MVNLIDDIDNSMKLIREKKYKSISSRIDTSRKKLRNVEDIHRGLALQFDARHEDPHYGLV
ENEGDYNSMLGFPHGGPRIIAVRLPPGHHSHHHPSLHSGTGASDLSTFALLE
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtgggaagatccagatcaagaaaatagagaaccaaaccaacagacaagttacc
tattccaaaagaagaaatgggcttttcaagaaagctcgtgagctcacagttctctgtgat
gccaagatttccattattatgatctccagcactcagaagctccatgaatacatcagcccc
attatcacgacaaagcagatatttgatgagtaccagaagacagtcacggcagatctctgg
agctcacactatgagaaaatgcaagagcacttgaagaagctgaaggagatcaataggaat
ctgataaaggagattagacaaagaacaggagatagcttgaacgatttggggtatgagcaa
atggttaatctcatcgacgatatagacaattctatgaagttgattcgtgagaaaaagtac
aaatccatcagcagcaggattgataccagcagaaaaaagctaaggaatgttgaagacata
cataggggtcttgcgcttcaatttgatgcacgacacgaggatccacactatgggctagtt
gaaaacgaaggtgattacaactctatgttggggtttccacatggcgggccaaggatcatc
gcggttcgccttccacctggtcaccactctcaccaccatccgagcctccacagtggaact
ggagcctcagacctcagtacatttgctttacttgagtaa
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