Salvia hispanica (chia): 125224242
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Entry
125224242 CDS
T09851
Name
(RefSeq) structural maintenance of chromosomes protein 2-1-like
KO
K06674
structural maintenance of chromosome 2
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shis03036
]
125224242
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
125224242
Condensin II
125224242
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
DUF7310
CEP135_N
AAA_29
FliJ
ABC_tran
DUF6447
Motif
Other DBs
NCBI-GeneID:
125224242
NCBI-ProteinID:
XP_047983566
LinkDB
All DBs
Position
4:17484210..17492970
Genome browser
AA seq
1176 aa
AA seq
DB search
MHIKEICLEGFKSYATRTVVPGFDPYFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS
NLQELVYKQGQAGITKATVSIVFDNSDRSRSPLGYEDSPEITVTRQIVVGGRNKYLINGH
LAQPSRVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPETLSMLEEAAGTRMYETKKEA
ALKTLEKKQSKVDEIDKLLDQEILPALQKLRKERMQYMQWANGNAELDRLKRYCIAYEYV
QAEKDRDNTFQGVQAIRNKMLEIDSTVGKMHEKTQEMEMQITKLSAEKEASMGGELKLLS
EKADVLSSDLVKETSAFQSQEDNLNTEKDNVAKIERNLQESKLAAEEKATAIKTAEDGAA
DLRKKFQELSKSLDEHQKEFQGVMAGKSNGNDEKCLEDQLVDAKRAVGQSETELKQLQNQ
INHVEKELKEKKTQLASTSAKAAAIDNELNAKRKEVGIVEKELESLSYDETLMESLQKDR
MFESETVQKLERRAREVSSRLGRVEFNYRDPEKNFDKSKVKGVVAKLIKVKDSSAVVALE
VAAGGKLFNVVVDTENTGKQLLQKGGLQRRVTIIPLNKIQTHPVSKRIQDAAVKLVGEGN
AAVALSLVGYDQELQSAMEYVFGSTFVCKTIDAAREVAFTREIGTPSVTLEGDIFQPSGL
LTGGSRKGGGDLLRQLHDLAEVELELSNHQKRLSEIEAKINALLPLQRVFQNLKKNLVLQ
SHELRLLEDRAKQTEHHQLSEWVQSTEEKLAESKSAIMDKKVLYDECVTRVSSLQKSIHD
HTGNRESRLKDLEKKIKAIKTQMQAASENLRQHETEIERLVMEMEANKKECLSLESQLEA
LNKHIVDLTSELDSQRTKVSSIKKCCDEVQAEHKLASRKIKECDSQISGIAKEQQDIQQK
ISEANLERKRMENEVKRMEMDQKDCALKVDKMIEKHAWIASEKQLFGRAGSDYDFESHDP
LKAREDFEKLQAEQSGLEKRVNKKVMSMFEKAEDEYNDLISKKNIIENDKSKIKMVIEEL
DEKKKETLKVTWNKVNKDFGSIFSTLLPGTMAKLEPPEGGSFLDGLEVRVAFGSVWKQSL
SELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIV
VSLKEGMFNNANVLFRTKFVDGVSTVQRTVTKQQNK
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgcacattaaggaaatctgtcttgagggttttaaatcctacgcaacgagaaccgttgtt
ccgggcttcgacccgtatttcaacgctataacaggcctcaatggctccggcaaatcgaac
atcctcgattcaatatgctttgtgctgggaatcaccaatttgcagcaggttagggcttct
aatttgcaggagctggtgtacaagcagggccaagctggaatcaccaaggccactgtatcg
attgtttttgacaactctgaccgtagtcgaagtcctcttggatacgaagattctcctgaa
attactgtaactcgtcagattgtcgttggtggaaggaacaagtacttgatcaatgggcat
ctggctcagcctagtcgagttcagaatcttttccactcagttcagctgaatgtaaataat
ccacactttcttataatgcaaggccgtattactaaagtcttgaatatgaaacctcctgaa
acattgtcaatgctcgaagaagctgctgggaccagaatgtatgaaacgaagaaagaggct
gcccttaaaacacttgaaaagaagcagagcaaggttgatgagatagacaagcttttggac
caggaaatactcccagctctgcagaagttgagaaaagagaggatgcagtacatgcaatgg
gccaacggaaatgctgagttggacagacttaagagatattgtattgcttatgaatacgtt
caagcggaaaaagatagggataacacttttcaaggcgttcaagccataagaaataagatg
ctggagattgattcaactgttggaaaaatgcacgagaaaacacaggaaatggaaatgcag
ataacaaagctgagtgctgaaaaagaagcgagcatgggcggggagctaaagttattgtca
gaaaaagctgatgtgctatcaagtgatctggtgaaagaaacttcggcattccaaagccaa
gaagacaatcttaatactgagaaagataacgtagccaagattgagaggaaccttcaagaa
tcaaaactagcagctgaagagaaggctactgcaattaaaactgctgaagatggagctgct
gatctcagaaaaaaatttcaggagctttcaaagagtttggatgagcatcagaaagaattc
caaggtgtgatggcaggtaagagtaatggaaatgatgagaagtgccttgaagaccaactg
gtagatgccaagagagctgtaggacagtcagagacagaactgaagcagctgcaaaatcag
ataaaccatgttgagaaagagctgaaggagaaaaaaactcagttggcatcgacatctgca
aaagctgctgctatagacaatgagctaaatgccaagagaaaagaagtcggaatagttgaa
aaggaactggaatctctttcctatgatgagacccttatggagtcactccaaaaggatcgc
atgtttgagtcagagacagtacagaaacttgaacggagagcacgcgaggtttcttcaaga
ttgggtagagtcgaattcaattatcgcgacccggaaaagaattttgataagtcaaaggtg
aaaggtgtggtcgccaaactaataaaagtaaaggatagctctgcagtggttgccttagag
gtggctgctggtggcaaattgtttaatgttgttgtagacacagagaatactggaaaacaa
cttcttcaaaagggtggtctgcaaaggagagtcacaattattcctttaaacaagatccaa
actcaccctgtctcaaagagaatccaagatgctgctgttaaattggttggcgaaggcaat
gctgcagtggcactttctttggttggatacgatcaagagcttcaaagtgccatggaatat
gtgtttggatcaacatttgtttgcaaaacaattgatgctgcaagagaggtagccttcacc
agagaaataggaacaccaagtgttacactggaaggtgatattttccaacctagtggactt
ttgactggtggtagtcgcaaaggtggaggtgatctgttgagacagcttcatgatttggca
gaagttgaattggaactctctaatcatcagaagagattatcagaaattgaagctaagatc
aacgcgcttcttccccttcaaagagtgtttcaaaaccttaagaaaaatttggtactccag
tcgcatgagctcagactcttagaggacagggctaaacaaactgagcaccatcagctcagc
gagtgggtacagagtactgaggagaagctagccgaatcaaaatcagcaattatggacaag
aaagttctgtatgatgaatgtgtgaccagagtgtcatcccttcagaagtcaatccatgac
cacactggaaatagggagagtaggcttaaggatttagagaaaaagatcaaggctattaaa
acccagatgcaggcagcttcagagaacctcaggcaacacgagactgaaattgagcggctg
gtaatggaaatggaagcaaataaaaaagaatgcttatcactggagagccagttagaagct
ttgaataagcacattgtggatcttacttctgaactggattctcagagaaccaaggtttct
tctattaagaagtgttgtgatgaagtccaagctgagcacaagcttgccagcaggaagatc
aaggagtgtgattcacaaataagtggtattgccaaggagcagcaggatatccagcaaaag
attagtgaggccaatctagagaggaaaagaatggaaaatgaggtcaagcgcatggaaatg
gatcagaaagattgtgcattgaaggttgataaaatgattgaaaagcatgcatggattgca
tctgagaagcaactttttggacgagctggatcagattacgattttgagtcccacgatccc
cttaaggctagggaagactttgagaaactgcaagctgagcaatctggtttagagaagagg
gtgaataagaaggtcatgtccatgtttgaaaaagctgaagatgagtacaatgatttgata
tctaaaaagaacataatcgagaatgacaagtcaaaaatcaaaatggttattgaagagctt
gatgagaagaagaaggaaacactcaaagttacttggaataaagttaacaaagattttggt
tcaatattttctaccctcttgcctggcacaatggccaaactggaacctcctgaaggaggc
agcttccttgatggcttggaagttcgagttgcttttgggagtgtctggaaacagtccttg
tctgagctcagtggggggcaacgatctctactcgcactttctctaatcttagctctgctt
ctttttaaaccagctccattatatatactggatgaggttgatgcagctcttgatttaagc
cacacacagaacattggaagaatgatcaaatctcactttccacactcccaatttattgta
gtctccttgaaagaaggcatgtttaacaatgccaatgttcttttccggaccaaatttgta
gatggtgtctctactgttcagagaactgtgacaaaacagcaaaacaagtaa
DBGET
integrated database retrieval system
