Salvia hispanica (chia): 125224308
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Entry
125224308 CDS
T09851
Name
(RefSeq) protein FIZZY-RELATED 2-like
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
shis
Salvia hispanica (chia)
Pathway
shis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125224308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125224308
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
125224308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
ANAPC4_WD40
EIF3I
Beta-prop_IFT140_1st
WDR55
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
eIF2A
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_RIG_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_VPS8
KNTC1_N
Beta-prop_SCAP
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_WDR75_1st
Aldo_ket_red
Beta-prop_LRRK2
Beta-prop_SPT8
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
125224308
NCBI-ProteinID:
XP_047983647
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Position
4:complement(8873685..8877394)
Genome browser
AA seq
445 aa
AA seq
DB search
METSMFSPDSKTPSPKLLYRRPSSSRTIYGDRFIPSRSSSNFALFNLPNSTSNHDSTSPY
NNLLKSALFGPECLQPSTPQKSSSSSRNSINATDFLTSPPNCNIFKYKTETKKPLHSLTP
FGFDPHGPTAKAPRELPRSPYKVLDAPGLEDDFYLNLVDWSSHNVLAVGMGNSVYLWHAS
NSKVVKLCDLQSDDSVCSVRWAQHNTHLAVGTNNGKLQLWDTSRCKRIRTMDGHRKRVGA
LAWSSSTLSSGSRDKSILQRDIRAREDYVSKLTGHKDEVCGLEWSYDNRELASGGGDDRL
FVWNQHSTQPVLKYCEHTAAVKAIAWSPHLYGLLASGGGSADRCIRFWNTTTNTKLSSMD
TGSQVCNLAWSKNVNELVSTHGYSKNQIILWRYPSMSELATLTGHTSRVLYLAISPDGQT
IVTGSGDETLALESFRFAKISEHKK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgagcatgttctctcccgactccaaaactccgtcgccgaagcttctctaccgc
cgcccctcttcctcccgcacaatttacggggatcgcttcatccccagccgctcctcttcc
aatttcgccctctttaatcttcctaattctacctccaaccatgattcaacttcgccctac
aacaacctcttgaagtccgccctcttcggccctgaatgcctccagccttccacgccccag
aaatcttcctcctcgagcagaaatagtatcaatgctactgatttcctcactagtcctccc
aattgcaatattttcaagtataaaaccgaaacgaagaaacccctgcattcgctcacgccg
tttggatttgatcctcacggtcctactgctaaggccccaagggaacttcctaggtctcct
tacaaggttctggatgcacctggtttggaagatgatttctatctcaacctcgtcgactgg
tcttcgcataatgtgctggctgtggggatgggaaactctgtttatttgtggcatgcttct
aacagcaaggtagtgaagttgtgcgatttacaatctgatgatagtgtctgttctgttcgc
tgggctcagcacaatacacatcttgctgttggaactaacaatgggaaactccaattatgg
gatacttctcgttgcaagaggataagaacaatggatggacatcggaagcgagttggagcc
ctagcctggagttcatccacattgtcttcaggaagccgcgataaaagtattcttcagcgt
gatatacgagctcgggaagattacgttagcaagttaaccgggcataaagatgaggtttgt
ggattggagtggtcttatgacaatcgagaattagcatcaggtggaggtgacgatagactt
ttcgtatggaatcaacattcgacccagcctgtgctaaaatactgtgaacacactgctgct
gtaaaagcaattgcgtggtcgccccatctttatggactccttgcttccgggggtggaagt
gctgaccgatgcatccgtttctggaatacaactactaatacaaaactaagtagcatggat
actggaagtcaggtgtgcaatctcgcgtggtcgaagaatgtcaatgaacttgtgagcacc
catggctactccaaaaaccaaataatcttgtggagatatccttcaatgtcagagttggct
accctcactggccatacatccagagtactctaccttgccatttcaccagatgggcagaca
atcgtaacaggatcaggagatgaaacgcttgctctggaatcttttcgctttgccaaaatc
tcagaacacaaaaagtga
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