Salvia hispanica (chia): 125224346
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Entry
125224346 CDS
T09851
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shis03036
]
125224346
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
shis00535
]
125224346
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
125224346
Meiosis-specific proteins
Cohesin complex and associated proteins
125224346
Proteoglycans [BR:
shis00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
125224346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
Microp_apicomplexa_7
AAA_29
Motif
Other DBs
NCBI-GeneID:
125224346
NCBI-ProteinID:
XP_047983686
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Position
4:complement(49622899..49635180)
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AA seq
1215 aa
AA seq
DB search
MYIKQVVIEGFKSYREQISTETFSPKVNCVVGANGSGKSNFFHAIRFVISDLFHNLRNEE
RQALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGVKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
DTGNKRKQIIQVVQYLDDRLRELDEEKEELKKYQQLDRQRKSLEYTIYDKELHDAKQQMA
KIDEDRYMVSKISATMYNSVLDAHEKCKELDKLLKDLTKEAQILSREKEAVEKQKIEAIK
KRAKLELDNKDFDDKIRGNIRAKEDAVIQLELLEKEIEESNTELTSVKNSHDLQIGEEER
LTLGIMDSEKKLSILYQKQGRATQFGNKADRDRWLTKEIKDYEQVLSSNLVQEKKLSDEI
EQLNREISTQDDYIKGRKDDAAKLESSISGYRHSYNQFKVERDKLHDERKTLWGRESEQA
AEIERLKSDVLKAEKSLDHATAGDIRRGLNSVRRISDQHGIGGVYGPVIELLECDEKYFT
AVEVTAGNSLFQVVVENDDISTKIIGHLNAQKGGRVTFVPLNRVKAPHVTYPQSSDVIPL
LKKLNFLEKYRAAFGQVFAKTVICRDLDVASRVARADGLDCITLEGDQVNKKGGMTGGFY
DYRRSKLKFMSTIRQNMKSVKKKEDELNKIRDELQMTDQKINERVAEQQKNDAKMAHEKS
VLEQLKQDVMNAEKQKHSISKSRREKKKLLPSVLNQIKQNRDNIAMKKDEMGTELVDHLT
PEEKESLSRLNPEITNLKQQLITCRSNRMETETRKAELEMNLSTNLVRRKEELEAVMLSS
DNDVLQAEAELKRQELMDTNSLVGQLTQELKSVTQSIDETKRKMEEIKVEKDELKGFEDE
YRTTLQDEAKELEQLLSKKNIYVAKQEEYSKKIRELGPLSSDAFETYKRKSIKELYKLLH
KCNEELKKFSHVNKMALDQYVNFTEQREELQKREAELNAGDEKIKELITVLDMRKDESIE
RTFKGVAKHFREVFSELVQGGHGFLVMMKKKDMEDADNDLDDDEPRSVDTESRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMVRRLADMASTQFITTTFRQELVKVADKIYGVTHKNRVSRVNVITKEDALDFIDHDQS
HNERDGKTFMTSSVE
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagcaggttgtaatagaagggtttaagagttacagggaacagatctcaact
gaaacattcagtcccaaagttaattgtgttgttggtgctaatggctccggtaaatctaat
ttcttccacgcaatacgctttgtaataagtgacctattccataacttgcgtaatgaagaa
aggcaagcattgctgcatgaaggtgcaggccaccaggtgttatcagcatttgtggagatc
gtgttcgacaactcggacaatcgtatccctgttgataaagaggaagtccggctaaggaga
acaattggtgtcaagaaagacgaatatttcttggatggaaaacatatcacgaagacagaa
gtcatgaatctgctggaaagtgccggattctctcgttcaaatccttattatgttgtgcag
cagggaaagattgcatcattaacattgatgaaagattctgagcggttggatctgctaaag
gaaattggggggactagggtatatgaagagcgacgtcgtgaaagcttgaaaatcatgcag
gatactggtaacaagaggaagcagattattcaagttgtacaatacttggatgaccgacta
cgtgagcttgatgaagagaaagaggaattgaaaaaatatcagcagcttgaccggcaaagg
aagtctttggagtataccatttatgataaagaactccatgatgcgaagcagcaaatggca
aagatagatgaggatcgatatatggtttctaaaatatctgcgacaatgtataatagtgtt
ttagatgcccatgagaagtgcaaggagttagacaaattgcttaaagatctgaccaaagaa
gctcagatattgagcagagagaaagaagcggtagagaaacaaaagatagaagctataaag
aagcgtgcaaaacttgagcttgataacaaagactttgatgataagattagaggaaatatt
agagctaaggaggatgctgtgatacaacttgagcttttggaaaaagaaattgaggaatcc
aacactgagctgactagtgtcaagaactcgcatgatttgcagatcggggaggaggagcgt
ttgactctagggattatggacagtgaaaagaagcttagcattctatatcagaaacaaggg
cgtgcaacacagtttggtaataaagcagatcgtgaccggtggctaacaaaagaaattaag
gactatgagcaagttttgtcctctaaccttgtacaggagaaaaaacttagtgatgaaatt
gagcagctcaacagagagatcagcacgcaggatgactacataaaggggcgaaaagatgat
gcagcaaagttagaatcttcaatttctggatatagacacagctacaaccagttcaaagtg
gagagagacaaactgcatgatgagcggaagacattgtggggaagagaaagtgagcaagct
gctgaaattgaaaggctcaagtcggatgttcttaaagcagagaaaagccttgatcatgcc
actgctggtgatataagaagaggacttaattctgtgaggaggatatctgatcagcacggt
attggtggagtatatggccctgttattgagttgctagagtgcgatgaaaaatatttcaca
gctgttgaagttactgctggaaacagcttattccaggtggtggttgaaaatgatgatata
tcaaccaaaataattgggcacctcaatgcacagaaaggcggccgggtcacatttgtaccc
ttgaacagggtgaaagccccacacgtcacatatccacagagctctgatgtgataccgctt
ttgaagaaattgaatttcttagagaaatatcgtgcagcctttggtcaggtgtttgcaaag
actgtaatttgcagagatttagatgttgcttcgagagttgcccgtgctgatggtttggac
tgcatcacattggaaggtgatcaagtaaacaaaaagggtggcatgactggtgggttttat
gactataggcgttccaaactgaaatttatgagcaccattagacagaatatgaagtcggtg
aagaaaaaggaagatgaactaaataaaatcagagacgaacttcaaatgactgaccagaaa
atcaatgagcgggtggctgagcagcaaaaaaatgatgccaagatggcccatgaaaaatct
gtacttgaacagttgaagcaggatgtaatgaatgctgagaagcaaaagcattctatctcg
aaatcacgtcgtgagaagaaaaagctccttcccagtgtattaaatcaaataaagcagaat
agagataatattgctatgaagaaagatgaaatgggaactgaacttgttgatcacttgaca
ccagaagaaaaagagtctctctctcgtttgaaccctgaaataactaatctgaagcaacag
ctaattacctgcaggagcaaccgcatggagactgaaacaagaaaagcagagctggagatg
aacctatctactaatcttgttaggcgaaaggaagagttggaggctgtaatgctatcttca
gacaatgatgtgttgcaagcagaagctgagttgaaaaggcaggagttaatggataccaat
tcattagttggtcaattgacccaggagctaaagagtgtaactcagagtatagatgagaca
aaaaggaaaatggaagagattaaagttgaaaaggatgagctaaagggatttgaagatgag
taccgaactactctccaggatgaagcaaaagaactggaacagttattgagtaagaagaat
atatatgtggccaagcaagaggagtactcaaagaaaatccgggaattgggtcccctatcg
tctgatgcttttgaaacgtacaaacggaagagtattaaagaattatataaattgcttcat
aagtgtaatgaggaactgaaaaaattcagccatgttaacaaaatggcacttgatcagtat
gtcaacttcacagagcaaagagaagagctccagaaaagagaagctgagctgaatgctggt
gatgagaaaatcaaagaactcataactgttttggatatgaggaaggatgaatcaattgaa
cgcacgtttaaaggcgtagccaagcacttccgagaagtgttttctgaactcgtacaagga
ggtcatggctttttagttatgatgaagaaaaaggatatggaggatgccgataatgatcta
gatgatgatgagcctcgttcagtggatacagagagcagggttgagaaatacattggtgtc
aaagtgaaggtttcttttactgggcaaggggagacgcagtcgatgaaacaattatccggg
gggcaaaaaactgtggttgctctagcactaatctttgccattcagcgatgtgatcctgca
ccattttacctttttgatgagatagatgcagcacttgacccccagtaccgaactgcagtc
gggaacatggttcgtcgtctggcagacatggccagcactcagtttattactacaacattt
cgtcaagagctagtgaaagtcgctgacaagatatatggtgtgacgcacaaaaacagagtc
agccgagtcaatgtaatcaccaaagaagatgctttagattttatcgaccatgatcaatcc
cacaacgagagagatgggaaaactttcatgacaagcagcgtagaatga
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