KEGG   Salvia hispanica (chia): 125224393
Entry
125224393         CDS       T09851                                 
Name
(RefSeq) clathrin heavy chain 1-like
  KO
K04646  clathrin heavy chain
Organism
shis  Salvia hispanica (chia)
Pathway
shis04142  Lysosome
shis04144  Endocytosis
shis05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:shis00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    125224393
   04142 Lysosome
    125224393
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    125224393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:shis04131]
    125224393
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shis04147]
    125224393
Membrane trafficking [BR:shis04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    125224393
Exosome [BR:shis04147]
 Exosomal proteins
  Proteins found in most exosomes
   125224393
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B TPR_Vps41
Other DBs
NCBI-GeneID: 125224393
NCBI-ProteinID: XP_047983747
LinkDB
Position
4:complement(44781861..44793927)
AA seq 1704 aa
MAAANAPITMKETLTLTSIGINPQFITFTNVTMESDKFICVRETAPQNSVVIVDMSMPNQ
PLRRPITADSALMNPISRILALKAQLPGTTQDHLQIFNIEAKAKLKSHQMPEQVIFWKWI
TPKMLGLVTQSSVYHWSIEGESEPAKMFDRAANLANNQIINYKCDPSEKWLVLIGIAPGS
AERPQLVKGSMQLFSVDQQRSQALEAHAASFASIRVPGNDKDSILISFATKTSNAGQTTS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYGLTYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNESTIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRADPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYIRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSKEWAMECMKDLLLVNLRGNLQIIVQVAKEYCEHLGVEACIKLFEQFK
SYEGLYFFLGSYLSSSEDPEIHFKYIEAAAKTGQIKEVERVTRESEFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYSNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWAKVLDPENEFRRLLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVDAQLYE
EAYAIFKKFNLNVQAVNVLLDNIRDINRAVEFAYRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLEVIRAAEDADVYHDLVKYLLMVRQKSKEPKVDSELIYAYAKIERLGDI
EEFILMPNVANLPSVGDRLYDEALYEAAKIIFAFISNWGKLACTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRHEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYI
QYDEFDNAATTVMNHSPEAWDHMQFKDIIVKVANVELYYKAVHFYLQEHPDLINDVLNVL
ALRLDHTRVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYTEEEDYDRLRESIDL
HDNFDLIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWVNNMIDFAFPYLLQFIREY
SGKVDELIKDKIEAKKEEKAKENEEKDVIMQQNMYAQLLPLALPAPPMPGMGGGYAGQPP
PPMGGMGMGMPPMPPFGMPSMGSY
NT seq 5115 nt   +upstreamnt  +downstreamnt
atggcggccgcaaatgctccgatcaccatgaaggaaaccctaacgctgactagcatcggt
atcaatccacagttcattactttcacaaatgtgacaatggaatcggataagtttatatgt
gttcgggagacggcacctcagaacagtgtggttattgtcgacatgagcatgccaaatcag
cctttgaggcgtcctatcactgcagattcagctcttatgaatccaatttctcgaatctta
gctctaaaagctcaacttcctggaactacacaagaccacttacaaatatttaacattgag
gcaaaggccaaactgaagtcccatcagatgcctgagcaggtcatattttggaagtggatt
acacctaagatgttgggtttagttacacaatcatcagtgtatcactggtcaattgaaggt
gagtctgaacctgcaaagatgtttgacagagctgccaatctagcaaacaatcagataatt
aattataagtgcgatccatctgaaaaatggttggttttgatagggatcgctcctggttct
gctgagaggccacaacttgtcaaaggaagtatgcagctattttctgtagatcagcaacgt
agccaagcacttgaagcacatgctgcatcatttgcctctatcagagtaccagggaatgat
aaggattccattcttatttcctttgctacgaagacctctaatgctggacagactacttct
aagttgcatgttattgagcttggtgctcagccaggaaaaccatcatttacgaagaagcag
gcagatcttttcttccctccagattttgctgacgattttccagtggccatgcagatttcc
cacaagtatggcctgacatatgtgatcacaaagcttggcctgctatttgtatatgacctt
gaaactgcaacagctgtatacagaaacagaatcagccccgatcccatatttctaacatcc
gaagcttcatcagttggaggtttctatgcaattaataggcgtggtcaagttttacttgcc
acagtaaatgaatcgactattgtcccatttgtcagtgggcaattaaacaatctggagctt
gcggtaaatcttgccaaaagaggaaacttacctggggcagagaatttggttgttcagcgt
tttcaagaattgtttgctcagacaaagtacaaagaggctgctgagcttgctgcagaatct
ccacaaggcatccttaggacacctgatactgttgccaaatttcagagtgttcctgttcaa
gctgggcagacaccacctttgctgcagtattttggaacacttttaaccaaaggaaagctc
aatgcatttgagtctttggaattgtctcgacttgtggtcaaccagaataagaagaatcta
ctggagaactggttggctgaagacaaactggaatgcagtgaggaacttggagatctcgtc
aagactgttgacaacgaccttgcactgaaaatttatatcaaagccagagctacaccgaaa
gttgtggctgcttttgctgagcgtcgggagtttgacaaaatcctgatttactcaaaacag
gttgggtacacacctgactatcttttccttctgcaaaccattcttcgagcagatcctcag
ggagctgttaattttgcccttatgatgtctcaaatggaaggaggttgtcctgttgattac
aataccattaccgatctatttcttcagaggaacttgattcgtgaagcaacggcttttctg
ctggatgttttgaaaccaaatttaccagaacatggtttcttgcaaacaaaggtcttggag
ataaatcttgtgacatttccgaatgttgctgatgctattttggcaaatggcatgtttagt
cattatgacaggccacgtgtagcacaactatgtgagaaagctggtctttacattcgggca
cttcagcattactccgaactgcctgacatcaagcgagttattgtgaacacccatgcaatt
gagccacaggcacttgtggagttctttgggacactttccaaggaatgggctatggagtgt
atgaaggatctgttattggttaatttaagaggaaatcttcagataattgtgcaggttgct
aaggagtattgtgaacatctgggagtcgaagcatgcattaagctctttgagcagttcaaa
tcatatgaagggttgtatttcttcctaggatcatatttgagctccagtgaggatcccgag
atccactttaagtatattgaggcagctgctaagactggacaaattaaagaggttgaacgt
gttacaagagaatcagagttctatgaccctgaaaagactaagaactttttaatggaagca
aaacttcctgatgcacgtccgttaatcaatgtgtgtgaccgatttggttttgtgcccgac
ctcacacattacttgtactccaacaacatgcttcgctacattgaaggttatgtgcaaaag
gtcaatccaggaaatgctccattagttgttggacaactgttagatgatgaatgcccagaa
gatttcattaaaggccttatcctttctgtccgctctctgcttccagttgagcctcttgtg
gaggagtgtgagaagaggaatcggcttcgcctgcttacccagtttctggaacatcttgtg
agtgaaggaagccaggatgtgcatgttcacaatgctttgggtaaaatcataatagatagc
aataacaatccagaacacttcctcactaccaatccatactatgattcacgtgttgtggga
aaatactgtgagaagcgtgaccctacgcttgctgttgttgcataccgcagagggcaatgt
gatgatgaactcatcaatgtgacaaataagaactctttgttcaagctgcaggctaggtat
gttgttgaaagaatggatggtgatctctgggccaaagttcttgatccggaaaatgaattc
agaaggctgctcattgatcaagttgtatctactgctttgcctgaaagcaaaagcccagag
caagtctctgctgctgttaaagcttttatgacagctgaccttcctcatgaactcattgag
ttgcttgaaaagattgtgcttcaaaactcagcattcagtgggaactttaatctgcaaaat
ttacttatcttgacagcaattaaagctgacccatcgagggttatggactatatcaataga
ctcgataactttgatggaccagctgttggtgaagttgctgttgatgctcaattgtatgaa
gaagcttatgctattttcaagaagttcaacttgaatgtacaggctgttaatgtgttgctg
gacaatattcgggatattaaccgagctgtggaatttgcttatcgtgttgaagaggatgct
gtttggagtcaagttgctaaagctcagcttcgggaaggtctagttagcgatgcgatagag
tcattcattcgtgcagatgatgcaacccaatttctggaagtaatccgggctgcggaagat
gctgatgtttatcatgacctagtgaaataccttctcatggtcaggcagaaatcgaaggag
cccaaagtggatagtgagctcatttatgcatatgccaagattgagaggctgggtgacatt
gaagaatttattctcatgccaaatgttgcaaatctgcctagtgttggtgaccgcttgtat
gatgaagccttgtatgaggctgcgaagattatctttgcttttatatctaactggggcaag
ctggcttgcactttagttaagttgaagcaattccaaggggctgtcgatgcagctcgcaaa
gctaatagtgcaaagacatggaaagaagtatgttttgcctgtgtggatgccgaggagttc
cgattggctcagatctgtggtctcaatattatcatacaggtggatgatctggaagaggtc
agtgagtattatcagaatagagggtgcttcaatgagctaatatctcttatggagagtggt
ctaggattggaacgtgcgcatatgggtatctttacagagctgggtgtcttatatgccaga
taccgccatgagaagctcatggaacacattaaattgttctccactcgtctcaatattccc
aagctgatcagagcatgtgatgaacaacagcactggcaagaacttacgtacttatacatt
caatacgatgagttcgataatgctgcaactacagtcatgaaccattcacctgaagcctgg
gatcacatgcaattcaaagatattattgtcaaggttgccaatgtggagctatactacaag
gctgtacatttctatttacaagagcacccagatctcatcaatgatgtcctgaatgtcctt
gcacttcgcctggatcacactcgtgttgtggacattatgcgaaaggctggtcatctacgt
cttgttaagccatatatggttgcagtccagagcaataatgtctctgcagtgaatgaagct
cttaatgagatctacacagaagaagaagattatgacagattacgtgaatctattgacttg
catgataactttgaccttattggccttgcccaaaagattgagaaacacgaactgcttgag
atgaggcgtgttgcagcctacatttacaaaaaggcaggcagatggaagcagtcgattgca
ttgtcaaagaaagataacctctacaaggatgcaatggagacagcttcacaatccggtgat
cgtgaacttgctgaggagttgcttgtttacttcattgaacaggggaagaaggagtgcttt
gcttcttgcctatttgtttgttacgacttgattcgcccagacgtcgcacttgaactagcc
tgggtgaataacatgattgactttgccttcccctatctgttacagttcatccgcgagtac
tctggcaaagttgatgagctaatcaaggacaagatcgaggctaagaaggaagagaaggct
aaagaaaatgaggagaaagatgtcatcatgcaacagaatatgtatgcccagctgttgcct
cttgctttaccagccccgcctatgccaggcatgggtgggggctatgctggtcagccaccc
ccgcccatgggtggtatgggaatgggaatgcctccaatgcctccatttggaatgccatca
atggggtcatattga

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