Salvia hispanica (chia): 125224393
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Entry
125224393 CDS
T09851
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
shis
Salvia hispanica (chia)
Pathway
shis04142
Lysosome
shis04144
Endocytosis
shis05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125224393
04142 Lysosome
125224393
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125224393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125224393
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shis04147
]
125224393
Membrane trafficking [BR:
shis04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
125224393
Exosome [BR:
shis04147
]
Exosomal proteins
Proteins found in most exosomes
125224393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
125224393
NCBI-ProteinID:
XP_047983747
LinkDB
All DBs
Position
4:complement(44781861..44793927)
Genome browser
AA seq
1704 aa
AA seq
DB search
MAAANAPITMKETLTLTSIGINPQFITFTNVTMESDKFICVRETAPQNSVVIVDMSMPNQ
PLRRPITADSALMNPISRILALKAQLPGTTQDHLQIFNIEAKAKLKSHQMPEQVIFWKWI
TPKMLGLVTQSSVYHWSIEGESEPAKMFDRAANLANNQIINYKCDPSEKWLVLIGIAPGS
AERPQLVKGSMQLFSVDQQRSQALEAHAASFASIRVPGNDKDSILISFATKTSNAGQTTS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYGLTYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNESTIVPFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRADPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYIRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSKEWAMECMKDLLLVNLRGNLQIIVQVAKEYCEHLGVEACIKLFEQFK
SYEGLYFFLGSYLSSSEDPEIHFKYIEAAAKTGQIKEVERVTRESEFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYSNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWAKVLDPENEFRRLLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVDAQLYE
EAYAIFKKFNLNVQAVNVLLDNIRDINRAVEFAYRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLEVIRAAEDADVYHDLVKYLLMVRQKSKEPKVDSELIYAYAKIERLGDI
EEFILMPNVANLPSVGDRLYDEALYEAAKIIFAFISNWGKLACTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRHEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYI
QYDEFDNAATTVMNHSPEAWDHMQFKDIIVKVANVELYYKAVHFYLQEHPDLINDVLNVL
ALRLDHTRVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYTEEEDYDRLRESIDL
HDNFDLIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELAWVNNMIDFAFPYLLQFIREY
SGKVDELIKDKIEAKKEEKAKENEEKDVIMQQNMYAQLLPLALPAPPMPGMGGGYAGQPP
PPMGGMGMGMPPMPPFGMPSMGSY
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaaatgctccgatcaccatgaaggaaaccctaacgctgactagcatcggt
atcaatccacagttcattactttcacaaatgtgacaatggaatcggataagtttatatgt
gttcgggagacggcacctcagaacagtgtggttattgtcgacatgagcatgccaaatcag
cctttgaggcgtcctatcactgcagattcagctcttatgaatccaatttctcgaatctta
gctctaaaagctcaacttcctggaactacacaagaccacttacaaatatttaacattgag
gcaaaggccaaactgaagtcccatcagatgcctgagcaggtcatattttggaagtggatt
acacctaagatgttgggtttagttacacaatcatcagtgtatcactggtcaattgaaggt
gagtctgaacctgcaaagatgtttgacagagctgccaatctagcaaacaatcagataatt
aattataagtgcgatccatctgaaaaatggttggttttgatagggatcgctcctggttct
gctgagaggccacaacttgtcaaaggaagtatgcagctattttctgtagatcagcaacgt
agccaagcacttgaagcacatgctgcatcatttgcctctatcagagtaccagggaatgat
aaggattccattcttatttcctttgctacgaagacctctaatgctggacagactacttct
aagttgcatgttattgagcttggtgctcagccaggaaaaccatcatttacgaagaagcag
gcagatcttttcttccctccagattttgctgacgattttccagtggccatgcagatttcc
cacaagtatggcctgacatatgtgatcacaaagcttggcctgctatttgtatatgacctt
gaaactgcaacagctgtatacagaaacagaatcagccccgatcccatatttctaacatcc
gaagcttcatcagttggaggtttctatgcaattaataggcgtggtcaagttttacttgcc
acagtaaatgaatcgactattgtcccatttgtcagtgggcaattaaacaatctggagctt
gcggtaaatcttgccaaaagaggaaacttacctggggcagagaatttggttgttcagcgt
tttcaagaattgtttgctcagacaaagtacaaagaggctgctgagcttgctgcagaatct
ccacaaggcatccttaggacacctgatactgttgccaaatttcagagtgttcctgttcaa
gctgggcagacaccacctttgctgcagtattttggaacacttttaaccaaaggaaagctc
aatgcatttgagtctttggaattgtctcgacttgtggtcaaccagaataagaagaatcta
ctggagaactggttggctgaagacaaactggaatgcagtgaggaacttggagatctcgtc
aagactgttgacaacgaccttgcactgaaaatttatatcaaagccagagctacaccgaaa
gttgtggctgcttttgctgagcgtcgggagtttgacaaaatcctgatttactcaaaacag
gttgggtacacacctgactatcttttccttctgcaaaccattcttcgagcagatcctcag
ggagctgttaattttgcccttatgatgtctcaaatggaaggaggttgtcctgttgattac
aataccattaccgatctatttcttcagaggaacttgattcgtgaagcaacggcttttctg
ctggatgttttgaaaccaaatttaccagaacatggtttcttgcaaacaaaggtcttggag
ataaatcttgtgacatttccgaatgttgctgatgctattttggcaaatggcatgtttagt
cattatgacaggccacgtgtagcacaactatgtgagaaagctggtctttacattcgggca
cttcagcattactccgaactgcctgacatcaagcgagttattgtgaacacccatgcaatt
gagccacaggcacttgtggagttctttgggacactttccaaggaatgggctatggagtgt
atgaaggatctgttattggttaatttaagaggaaatcttcagataattgtgcaggttgct
aaggagtattgtgaacatctgggagtcgaagcatgcattaagctctttgagcagttcaaa
tcatatgaagggttgtatttcttcctaggatcatatttgagctccagtgaggatcccgag
atccactttaagtatattgaggcagctgctaagactggacaaattaaagaggttgaacgt
gttacaagagaatcagagttctatgaccctgaaaagactaagaactttttaatggaagca
aaacttcctgatgcacgtccgttaatcaatgtgtgtgaccgatttggttttgtgcccgac
ctcacacattacttgtactccaacaacatgcttcgctacattgaaggttatgtgcaaaag
gtcaatccaggaaatgctccattagttgttggacaactgttagatgatgaatgcccagaa
gatttcattaaaggccttatcctttctgtccgctctctgcttccagttgagcctcttgtg
gaggagtgtgagaagaggaatcggcttcgcctgcttacccagtttctggaacatcttgtg
agtgaaggaagccaggatgtgcatgttcacaatgctttgggtaaaatcataatagatagc
aataacaatccagaacacttcctcactaccaatccatactatgattcacgtgttgtggga
aaatactgtgagaagcgtgaccctacgcttgctgttgttgcataccgcagagggcaatgt
gatgatgaactcatcaatgtgacaaataagaactctttgttcaagctgcaggctaggtat
gttgttgaaagaatggatggtgatctctgggccaaagttcttgatccggaaaatgaattc
agaaggctgctcattgatcaagttgtatctactgctttgcctgaaagcaaaagcccagag
caagtctctgctgctgttaaagcttttatgacagctgaccttcctcatgaactcattgag
ttgcttgaaaagattgtgcttcaaaactcagcattcagtgggaactttaatctgcaaaat
ttacttatcttgacagcaattaaagctgacccatcgagggttatggactatatcaataga
ctcgataactttgatggaccagctgttggtgaagttgctgttgatgctcaattgtatgaa
gaagcttatgctattttcaagaagttcaacttgaatgtacaggctgttaatgtgttgctg
gacaatattcgggatattaaccgagctgtggaatttgcttatcgtgttgaagaggatgct
gtttggagtcaagttgctaaagctcagcttcgggaaggtctagttagcgatgcgatagag
tcattcattcgtgcagatgatgcaacccaatttctggaagtaatccgggctgcggaagat
gctgatgtttatcatgacctagtgaaataccttctcatggtcaggcagaaatcgaaggag
cccaaagtggatagtgagctcatttatgcatatgccaagattgagaggctgggtgacatt
gaagaatttattctcatgccaaatgttgcaaatctgcctagtgttggtgaccgcttgtat
gatgaagccttgtatgaggctgcgaagattatctttgcttttatatctaactggggcaag
ctggcttgcactttagttaagttgaagcaattccaaggggctgtcgatgcagctcgcaaa
gctaatagtgcaaagacatggaaagaagtatgttttgcctgtgtggatgccgaggagttc
cgattggctcagatctgtggtctcaatattatcatacaggtggatgatctggaagaggtc
agtgagtattatcagaatagagggtgcttcaatgagctaatatctcttatggagagtggt
ctaggattggaacgtgcgcatatgggtatctttacagagctgggtgtcttatatgccaga
taccgccatgagaagctcatggaacacattaaattgttctccactcgtctcaatattccc
aagctgatcagagcatgtgatgaacaacagcactggcaagaacttacgtacttatacatt
caatacgatgagttcgataatgctgcaactacagtcatgaaccattcacctgaagcctgg
gatcacatgcaattcaaagatattattgtcaaggttgccaatgtggagctatactacaag
gctgtacatttctatttacaagagcacccagatctcatcaatgatgtcctgaatgtcctt
gcacttcgcctggatcacactcgtgttgtggacattatgcgaaaggctggtcatctacgt
cttgttaagccatatatggttgcagtccagagcaataatgtctctgcagtgaatgaagct
cttaatgagatctacacagaagaagaagattatgacagattacgtgaatctattgacttg
catgataactttgaccttattggccttgcccaaaagattgagaaacacgaactgcttgag
atgaggcgtgttgcagcctacatttacaaaaaggcaggcagatggaagcagtcgattgca
ttgtcaaagaaagataacctctacaaggatgcaatggagacagcttcacaatccggtgat
cgtgaacttgctgaggagttgcttgtttacttcattgaacaggggaagaaggagtgcttt
gcttcttgcctatttgtttgttacgacttgattcgcccagacgtcgcacttgaactagcc
tgggtgaataacatgattgactttgccttcccctatctgttacagttcatccgcgagtac
tctggcaaagttgatgagctaatcaaggacaagatcgaggctaagaaggaagagaaggct
aaagaaaatgaggagaaagatgtcatcatgcaacagaatatgtatgcccagctgttgcct
cttgctttaccagccccgcctatgccaggcatgggtgggggctatgctggtcagccaccc
ccgcccatgggtggtatgggaatgggaatgcctccaatgcctccatttggaatgccatca
atggggtcatattga
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integrated database retrieval system