Salvia hispanica (chia): 125224495
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Entry
125224495 CDS
T09851
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 19-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125224495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125224495
04147 Exosome [BR:
shis04147
]
125224495
04090 CD molecules [BR:
shis04090
]
125224495
Enzymes [BR:
shis01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125224495
Transporters [BR:
shis02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125224495
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125224495
CD molecules [BR:
shis04090
]
Proteins
125224495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
AAA_29
ABC_ATPase
AAA_22
AAA_16
AAA_21
AAA_15
AAA_25
Zeta_toxin
SbcC_Walker_B
NB-ARC
nSTAND1
Motif
Other DBs
NCBI-GeneID:
125224495
NCBI-ProteinID:
XP_047983858
LinkDB
All DBs
Position
4:25786001..25791361
Genome browser
AA seq
1195 aa
AA seq
DB search
MHSAEIIDEAGTSEKDDKPLTLPFYKLLSQADKVDWILMALGTLGAIVHGLAQPVGYFLL
GKALDAFGKNINNTDEMVKALFKVVPYVWYMAFATFPAGILEIGCWMYASERQVRRIRLS
FLKAVLSQEIGAFDTDLTSGKIITGISSHMFVIQDAIGEKLGHFISCFATFFSGVLIAFI
ACWEVSLLAIFVVPMILVIGATYTKKMNAVSATRMVYLSEATAMVEQTISHIKTVFAFVG
ENSAIRSFSESLQKQLGISRTEAFVKGFGTGLFQVVTFCSWALIVWVGAVVVTAGRALGG
DVIAAVMSILFGAISLTYAAPDMQLFNQAKAAGQEVFQVIERKPMICTNHEGKELDAIKG
SICINDVHFAYPSRMNTPILRGFSLSIPAGKVVAFVGSSGCGKSTIMSLITRFYDPIEGS
ILIDNYNIKDLDLKFLRRNIGVVSQEPSLFSGNIKENIQAGNWEADESQLQKAAQMANAH
SFICDFPNQYFTEVGQRGVQLSGGQKQRIAIARAILKNPPILLLDEATSALDTESEKLVQ
AALETAMQGRTVILIAHRLSTIVNADMIAVVENGVVTETGPHPHLLTSNNFYRSLFEMQN
LSQDSDARVEDPMEDLASIYTDASSHFPDESREANRTPQLSPNKEDLKERKERAVFYRIW
FGLRKREIVKIFIGSCGAALAGISKPVFGYFIITIGVAYYKDNSESRVGKYSILFACIGF
LSCFAHTVQHYFYGLIGEQAMTNLRQALYSAILRNELAWFEKPQNSVGSVTSQVINETAT
VKTIISDRMSVIVQCISSILIATVVSIRVNWRMGLVAWAVMPCHFIGGLIQAKSAKGFSA
AAMLLIQNWTQSIKYGIIQGVSLCLWNIAHAVALWYTTILVKRGQSSFENGIRSYQIFSL
TVPSITELWTLIPTVFSAISILTPAFHTLDRQTEIEPDEPKQPPRKSIKGDIEFSNVSFT
YPSRPDMIILDNFNLTIEAGSKVALVGPSGAGKSSILALLLRFYDVNEGAVLIDWKNVKS
YNLKVLRAQIGLVQQEPLLFSFSIRENICYGNEGASEAEVIQAAMEANIHEVISNLPRGY
DTSVGEKGCQLSGGQKQRIAIARVLLKKPAIMLLDEATSALDAESERAVINALESLKQNT
TNITVAHRLSTVINSDTIFVMDKGKVVEMGTHANLVTASEGVYSKLYRHQSFAGN
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtgcggagattatagacgaagcaggcacgtcggaaaaggatgataagccacta
accttgccattttacaagcttttgagccaagcagataaggtggactggattttgatggct
ctgggcaccttgggagccattgtccacggcctcgcgcagcctgtagggtatttcctgctg
ggaaaagcccttgatgcctttggtaaaaacatcaacaatactgatgaaatggttaaggca
ctttttaaggtcgttccatacgtgtggtacatggctttcgcgacatttccagctggaatt
ctagagataggatgctggatgtatgcaagtgaaagacaagtacgtcgcataagattatct
ttcctaaaagctgtacttagccaagagattggagcatttgatactgacttaacaagcgga
aagataatcactggtatcagtagccatatgttcgtcatccaagatgccatcggagaaaag
ttggggcatttcatatcatgcttcgctaccttcttctctggcgtcttgattgcattcata
gcctgctgggaagtgtcacttctagcaatatttgttgtccccatgattctcgtaatcggg
gctacttatacgaagaagatgaatgccgtttcagcaacaagaatggtatatctatcggag
gccactgcaatggtggaacagacaatttcccacatcaagactgtgtttgcatttgttgga
gagaattcagcaatcagatctttctcggaaagtttacagaagcagctgggaataagcagg
acagaagcatttgtgaaaggatttgggacaggactgttccaagttgtgacattctgttct
tgggctcttattgtgtgggttggagctgttgttgtgacagccgggagagcacttggagga
gatgttattgctgctgtcatgagcattctttttggtgctatatccctcacatatgctgca
ccagacatgcaactcttcaatcaagcaaaagcagcagggcaggaagtttttcaagtgatt
gaaagaaagccaatgatatgcacaaaccacgagggaaaagaactggatgccatcaaaggg
agcatatgtataaacgatgtgcactttgcatatccatccaggatgaatactccaattctt
cgaggattttcattatcgatcccagcaggaaaggtggttgcattcgttggaagtagcgga
tgtggcaagagcaccatcatgtcactgataacaagattctatgacccaatagaaggttct
attctcattgacaactacaacatcaaggatctcgatctgaagttcctcaggagaaacatc
ggagtagtttcacaggagccatcacttttttctggtaacatcaaggagaacattcaggca
ggaaactgggaagcagatgagagtcaactccagaaagcagctcaaatggcaaatgcacac
tcttttatatgtgattttccaaatcaatacttcactgaggtcggacaaaggggtgtccag
ttatcaggtggacagaagcagagaatagcaatagcacgggccatcctaaagaatcctcca
attcttttactagatgaggccaccagcgcccttgatacagaatcagaaaagctagttcaa
gcagctctcgagacagcaatgcaaggaaggacagtaattttgatagcacacagattatcc
accattgttaatgcagatatgattgctgtggtagaaaatggagtagttacagagacagga
ccacatcctcacttgctgactagcaacaatttttaccgtagcttgtttgaaatgcagaat
ctcagccaagatagtgatgcaagagtagaggacccaatggaagatttagcaagtatatat
actgatgcttcatctcacttccctgatgaatctagggaagccaacagaactccacaactt
tctcccaataaagaagatctcaaagaaaggaaggaaagggcagtattctacagaatctgg
tttggcttaaggaagagagagattgtaaagatttttattggctcttgtggagctgctctt
gcaggaatctctaaaccagtctttgggtacttcatcataacaataggagttgcatactat
aaagataattcagaaagcagagtagggaagtactcgatcctttttgcgtgtataggattt
ttgtcatgctttgcccatactgtgcaacattatttctatggcttgattggggagcaggcc
atgacgaacctcagacaagcattatattcagctatactacgaaatgagctggcctggttt
gagaagcctcaaaacagtgtaggatcagttacatcacaggttatcaacgaaacagcaaca
gtcaaaacaatcatatctgaccgtatgtccgttattgttcaatgcatctcctccatactg
attgcaacggtagtcagcatcagagtcaactggagaatgggcctagttgcttgggccgtg
atgccctgccactttatcggtggactgattcaagccaagtctgcaaaaggattctcagcg
gcagcaatgctgcttattcagaactggacacaaagcatcaaatatgggatcattcaaggt
gtatcactttgcttgtggaatatagctcatgctgttgcattatggtatacaactatcctc
gttaagagaggacaatcttcctttgagaacggaataagatcgtaccagatattttcactc
acagttccgtcaatcacagaattgtggacattgatacctactgttttctctgctatcagt
attctgaccccagcattccatacccttgaccgacagactgagattgagccagacgagcct
aagcaaccacctcgtaaaagcattaagggggatattgaattttcaaatgtgagtttcact
tacccctccagaccagatatgattatactcgacaacttcaacttgacaattgaagctgga
tcaaaagttgctctggttggaccaagtggagcagggaaatcttctattctagcacttcta
ctcagattttatgatgtgaacgaaggagcggtactaattgactggaaaaatgtgaagagt
tacaacctgaaagttctgagagcacagattggcttggtgcagcaggagccacttctattc
agcttctcaatcagagaaaacatatgctatggaaatgaaggtgcttccgaagctgaagtg
atacaggcagctatggaggccaacatccatgaagtgattagcaatctaccaaggggatac
gacacgtcagttggggaaaagggatgccaactttcgggtggacagaagcaacggatagca
attgcaagggttctgctgaaaaagccagcgataatgcttctcgatgaagccacaagtgca
cttgatgccgagtctgaaagggctgtcatcaatgctctggagtcactgaaacagaataca
acaaatattacagttgcacacaggctttcaactgtaatcaactcggacaccatatttgtt
atggacaaggggaaagttgttgaaatgggcacccacgcaaaccttgttacagcaagtgag
ggagtctactcgaaactttataggcaccagagttttgcaggaaattga
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integrated database retrieval system
