Salvia hispanica (chia): 125224533
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Entry
125224533 CDS
T09851
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shis03016
]
125224533
Enzymes [BR:
shis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
125224533
Transfer RNA biogenesis [BR:
shis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
125224533
Prokaryotic type
125224533
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
125224533
NCBI-ProteinID:
XP_047983902
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All DBs
Position
4:complement(56793852..56795908)
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AA seq
585 aa
AA seq
DB search
MAENSPPPPPPPPPSSPPPSEELPDPKRQKMSTTTTSTTSDEEIPQNGDAIPRAPKYKRR
KVAIFFAYCGVGYQGMQKNPGAKTIEGDFEEALFFAGAIPEDERGLHRRFDWARSARTDK
GVSAVGQVVSGKFFVDPPGFVERLNAHLSPQIRVFGYKRATPSFNAKKFCDRRRYVYLVP
VFALDPSCHRDRESVMASVGSGNELVKCVGCSERGRKVFGAVGKRTFGSGISSNNGSVLV
ENESVTDVSVLKPSVENGNGEAPKIEKFSKLEQVSEVSVYEIAEKRNDNGGNGAGDVEDA
VKIEQKSEFCYGEAEKERFNRILKSYEGTHNFHNFTTRTKAEDPAAKRYILSFNAKTVLN
IDGMDFIKCEVVGQSFMLHQIRKMIGLAVAIMRNLSPESLIEKAFEQKVNINVPMAPEVG
LYLDECFFSSYNQKWKHTHEELSMKDYAEEAEDFKMKYIYSHIAATEHKDGAVAVWLHSL
NYRNYPDLRYEDKVADECPSTEVAPIADGNEAVENCLGSKTTPVPEGIKAVDECPSTEVA
PIANGNEAVDSIPSSKITPVPEGSKVVDDCPSSEVEKGEKMNVDE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaactcacctccgccgccgccgccgccgccgccgtcgtcgcctcctccatca
gaagaactacccgacccgaaaaggcagaaaatgtcaaccaccaccacctccaccacctcc
gacgaagaaattccccaaaacggcgacgcaattcccagagcccccaagtacaagcgccgc
aaagtcgcgattttcttcgcctactgcggcgtcggctaccaggggatgcagaaaaacccc
ggcgccaagacaatcgagggcgatttcgaggaagccctctttttcgccggagcgatcccc
gaggacgagcggggcttgcacaggcggttcgattgggcccggtccgcccggaccgacaag
ggcgtcagcgccgtggggcaagtggtgtcgggcaaattcttcgtcgatccgcccggtttc
gtggagcggctgaacgctcacctttctccgcagattagggttttcgggtacaagcgcgcg
acgccgtcgtttaatgcgaagaagttctgcgatcggcggaggtatgtctatttggtgcct
gttttcgcgcttgatccgtcgtgccatcgtgatagggagagcgtgatggccagcgttgga
tcggggaatgagcttgtgaagtgtgttgggtgctcagagagagggaggaaggtttttggt
gctgttggaaagcgcacttttggttctggcatttcgtcgaacaatgggagtgtgttagtg
gaaaatgaatccgtaactgatgtctctgtgcttaagcctagtgttgaaaatgggaatggt
gaagctccgaaaatcgagaaattttcgaaattggagcaggttagcgaagtttcagtctat
gagattgcagaaaaacggaacgataacggtggcaatggtgctggagatgttgaggatgct
gtgaaaatcgagcaaaagagcgagttctgttacggggaggctgagaaggagaggttcaat
aggattctcaagtcgtacgaagggactcacaactttcacaatttcactaccagaaccaaa
gccgaggatcctgctgctaagcgatacattttgtcgttcaacgcaaaaactgtgctgaac
attgacggaatggatttcataaagtgtgaggtcgtggggcagagcttcatgcttcatcag
atacggaagatgatcggtcttgctgttgcgatcatgaggaacctcagccccgagtcgctg
attgagaaagctttcgagcagaaggtgaacattaacgtgcccatggcgcctgaagtcggg
ctgtatttggacgagtgcttcttctcgtcgtacaatcagaaatggaaacacacccatgag
gagctgtcgatgaaggattatgcagaggaagctgaggacttcaaaatgaaatacatttat
tcgcacattgctgcaaccgagcacaaggatggggctgtggccgtgtggctacattctttg
aactaccgcaactatccagacttgcgctatgaagataaggtggcggatgagtgcccgagc
acggaggtagctccaattgctgatggaaatgaggcggtcgaaaactgcctaggctcgaag
accactcccgttcctgagggaattaaggcggtggatgagtgcccaagcacggaggtagct
cccattgctaatggaaatgaggcggtcgatagcatcccaagctcgaagatcactcccgtt
cctgagggaagtaaggtggttgatgattgcccgagttcggaggtggagaagggcgaaaaa
atgaatgtggatgagtga
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