Spiroplasma helicoides: SHELI_v1c00280
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Entry
SHELI_v1c00280 CDS
T04620
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shj
Spiroplasma helicoides
Pathway
shj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SHELI_v1c00280 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shj03400
]
SHELI_v1c00280 (ung)
Enzymes [BR:
shj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SHELI_v1c00280 (ung)
DNA repair and recombination proteins [BR:
shj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SHELI_v1c00280 (ung)
Prokaryotic type
SHELI_v1c00280 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
CNOT1_HEAT_N
DUF739
Motif
Other DBs
NCBI-ProteinID:
AOG59983
UniProt:
A0A1B3SJ73
LinkDB
All DBs
Position
30071..30742
Genome browser
AA seq
223 aa
AA seq
DB search
MITNYMCSIKENWKKIFTSVDIFNKLTEILGEIEKLDKVCPKKEEIFKVFELLDFDKVKV
VIIGQDPYHTPNVANGIAFSSNNNSKTPASLRNIFKELKSDLNIDHFNKNDLSGWVEQGV
LLLNTSLSVKENEPASHKNLGWEKIILELLKKLYESNRNIIFCLWGNFSKTLYNKLNIKK
GYVIESAHPSPFSYKKGFENSKPFSKINGMLKKIDGSSIDWSL
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgattactaattacatgtgttctataaaagaaaattgaaaaaaaatattcacttcagtt
gatatatttaataaactaaccgaaatattaggagaaattgaaaaactagataaagtatgc
cccaaaaaagaagaaatatttaaagtttttgaacttttagattttgacaaagtaaaagta
gtaattattgggcaagatccctatcacacaccaaatgtagcaaatgggattgcatttagc
tctaataacaattcaaagacaccagcaagtttaagaaatattttcaaagaacttaaaagt
gatcttaatatagatcattttaataaaaacgacttatctggatgagttgagcaaggcgtt
ttattattaaatacttcgcttagtgttaaagaaaatgaaccagcatcacataagaattta
gggtgagaaaaaataattttagaacttttaaaaaaactttatgaaagcaatcgaaacata
attttttgtttatgaggaaatttttcaaaaacactatataataaacttaatataaaaaaa
gggtatgtgattgaaagtgcacacccctctccattcagctataaaaaagggtttgaaaat
agtaaacctttttcaaagataaatggaatgttaaaaaaaattgatggtagttcaattgat
tgaagtttgtaa
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