Spiroplasma helicoides: SHELI_v1c01060
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Entry
SHELI_v1c01060 CDS
T04620
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shj
Spiroplasma helicoides
Pathway
shj03420
Nucleotide excision repair
shj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SHELI_v1c01060 (pcrA)
03430 Mismatch repair
SHELI_v1c01060 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shj03400
]
SHELI_v1c01060 (pcrA)
Enzymes [BR:
shj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SHELI_v1c01060 (pcrA)
DNA repair and recombination proteins [BR:
shj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SHELI_v1c01060 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SHELI_v1c01060 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
AOG60061
UniProt:
A0A1B3SJG1
LinkDB
All DBs
Position
111603..113771
Genome browser
AA seq
722 aa
AA seq
DB search
MAEFLKNLNEQQLDSVITTDVPLRIIAGAGSGKTRVITTKIAYLIEKENILPNKILAVTF
TNKAANEMKERILKLSNNLYKVNHIMTFHSFCVRILREEFELLNLKQNFTIIDTSEQTRI
IRRILKSLDIVDQKSKPEKKIISKISRWKNSLTDWEEAYESSFNNQDKQFAKVYRDYQQY
LLENHLLDFDDLLLKAHTLFKNNLEVRQKWANRFSYILVDEFQDTNYIQFDLVKWITNGR
GCLTVVGDPDQTIYSWRGAKVNIILNFEKEFKNARTVQLNQNYRSTKPILDLANSFIDNN
KNREKKDIFTNKKEGTIVAVKECASRNFEAKYVAKKIKELVEEKKYKYSDFYVLYRTNAW
SFEFEKEFSNSKIPFQLVGGFEFRERKIIKDITALLKVVCFQDELSFERVFSFVQKVGPV
TAQKLIDCARRNDLSLFDLITQRQDLLITISKNLNSLANALNEGYKLFMNNERVLDICKK
LVNLSGYKEILDLKSKEDQEALQNLEAYYDQMAQFDKDYEQEASRVNRLTKFLQEETLSI
NSDGNIEVPNKVTLLTIHSAKGLENKVVFIVGVNKDVFPSRMSLSSIEALEEERRALYVA
ITRAQELLYISYVVGEYSYISSGELGASRFITELDPELYELEKNIFFHNPTDMTSQKVYF
EKKENIKLNHDVAVSKGDVIEHMMFGEGIVDKVMDKYIQIAFINPAFGVKAIPINSNSWK
KK
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatttttaaaaaatttaaatgaacaacaattagatagtgtcattacaacggac
gtaccgttaagaataattgcaggagctggtagtggtaaaacaagagtaatcacaactaaa
attgcctacttaatagaaaaagaaaatatattacccaacaagattttggctgttactttt
acaaataaagcagccaacgaaatgaaagaaagaatcttgaaactttcaaataacttatat
aaagttaatcacattatgacgttccactctttttgtgtaagaatattgagagaagaattt
gaacttctaaatcttaaacaaaattttaccattattgatacatcggaacaaaccaggatt
ataagaagaattttaaaaagtttagatattgtcgatcaaaaatcaaaacctgaaaaaaaa
ataatctctaagattagtagatgaaaaaattctttaacagattgagaggaagcctatgag
tcttcttttaataatcaagataaacaatttgcaaaagtttatagggattaccaacaatat
cttttagaaaatcatttgcttgattttgatgacctacttttaaaagctcatacactattt
aaaaataatttagaagttagacaaaaatgagcaaatagatttagttatatattggttgat
gagtttcaagatacaaattatattcaatttgacttggttaagtgaattacaaacggaaga
ggttgcctaacagttgttggtgatccggaccaaacaatttattcatgaagaggagcaaag
gttaatataattttgaactttgaaaaggaatttaaaaatgcaagaactgtacaattaaat
cagaattatagatcaacaaaaccgattttagatttagcaaatagctttatagacaataat
aaaaatagagaaaaaaaagatatttttacaaataaaaaagagggtactattgttgctgtt
aaggaatgtgcatcaagaaattttgaagctaaatatgttgctaaaaaaatcaaagagcta
gttgaagaaaaaaaatataaatattctgatttttatgtgctttatagaactaatgcttgg
tcttttgagtttgaaaaagaattttctaactccaaaatacctttccaattagttgggggt
tttgaatttagagagagaaaaattattaaagatattacagccttattaaaggttgtgtgc
tttcaagatgaattgtcttttgaaagagtattttctttcgttcaaaaagttggaccagta
acagcgcaaaaattgattgattgtgcacgcagaaatgatttgagcttatttgatttaata
acacaacgacaagatttattaattactatttctaaaaatttaaatagtttagccaacgct
cttaatgaggggtacaaactatttatgaataacgagagggtattagacatttgtaaaaaa
cttgttaatttgtcaggatataaagaaattttagatctaaaaagcaaagaagaccaagag
gcattacaaaatttagaggcttattatgatcaaatggctcaatttgataaagattatgag
caagaggctagtagggtaaatagactaacaaagttcttacaagaagaaactttaagcatt
aattctgatggtaatattgaagttcccaataaagttacccttttgacaatacactcagct
aaagggctagaaaataaagttgtctttattgttggtgtaaacaaagatgtttttccatca
agaatgagtttatcttctatcgaagcattagaagaagaaagaagagcgctttatgttgcg
ataactagagcacaagagttgttatacatatcttatgtagttggtgaatattcatacata
tctagcggtgaattgggagcaagtaggtttataactgaacttgatccagaactatatgaa
cttgaaaaaaacatatttttccataatccaacagatatgacaagccaaaaagtatatttt
gaaaaaaaagaaaatataaagttaaatcacgatgtagcagtttcgaagggtgacgtcatt
gagcatatgatgtttggagaaggaatcgtggacaaggttatggacaaatatatccaaatc
gcttttattaatccagcatttggtgtaaaagctataccaataaattcaaactcttgaaag
aaaaaataa
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