Spiroplasma helicoides: SHELI_v1c03840
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Entry
SHELI_v1c03840 CDS
T04620
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase CshB
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
shj
Spiroplasma helicoides
Brite
KEGG Orthology (KO) [BR:
shj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shj03019
]
SHELI_v1c03840 (cshB)
03009 Ribosome biogenesis [BR:
shj03009
]
SHELI_v1c03840 (cshB)
Enzymes [BR:
shj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SHELI_v1c03840 (cshB)
Messenger RNA biogenesis [BR:
shj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SHELI_v1c03840 (cshB)
Ribosome biogenesis [BR:
shj03009
]
Prokaryotic type
rRNA helicases
SHELI_v1c03840 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
AAA_7
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AOG60337
UniProt:
A0A1B3SK83
LinkDB
All DBs
Position
417666..419030
Genome browser
AA seq
454 aa
AA seq
DB search
MKFSDFGFKKFLNDALEEIGFLNPTKVQEKVIPLLKKQKSVICQSHTGTGKTHAFLLPIL
NNLDYSQQKTQLLVVTPTRELARQIFANVKELIQFNEQATCALFVGGDDIEKQQTNLQIK
QPMIVIGTPTRLKTLYEQNFLQITTSNYVVIDECDMIFDLGFIEDVDLMLSKINKNAKIS
LFSATFKNGLKPFLTKYLSQAVFVDNVDKKPSSKNIEHILIWTRNRENKEVLKVITNSIN
PYVAIVFVNKKDQVKEIINWLNEFGIKNVGELHGDLDPRQRTNMQKRIQNMEFKWIVASD
VAARGIDIDGVSHIISVDLPKDLDYYIHRSGRTGRNQYDGQSYVLFNSNNQHQIDTLKSL
GIEFSNKKLVDNNLVDIYEKKKVKVINTNSPGALEEKKIISKYKAKPVKPGYKKKRKAEI
EKVKKDIRRKHIKESIAKIKKAKYKKRREEIFND
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttagtgattttgggtttaaaaaatttttaaatgacgcgctagaagaaattgga
tttttaaatccaactaaagtccaagaaaaagtaatccctttattaaaaaaacaaaagtca
gttatctgtcaatcgcatactggaacaggaaaaacacatgcatttttattaccaatctta
aataatttagattatagtcaacaaaaaacacaattattggtggtcactccaacaagagaa
cttgcaagacaaatatttgccaatgtcaaagagttaattcaatttaatgaacaagctact
tgtgctttatttgtgggtggagatgatattgaaaagcaacaaactaatctacaaattaag
caaccaatgatagttataggtactccaacaaggctaaaaaccttatacgagcaaaacttt
ttacaaataacaacatcaaactatgtagtaattgatgaatgtgatatgatttttgactta
ggttttattgaagatgttgatttaatgctttcaaaaatcaacaaaaatgcaaaaattagc
ttattttcggctacttttaaaaatgggttaaaaccatttttaacaaaatatttatctcaa
gcagtttttgttgataatgttgataaaaaaccaagtagtaaaaatattgaacatatctta
atttgaactagaaatagagaaaataaagaagttttaaaagttatcacaaattccatcaat
ccatatgttgccatagtttttgtcaacaaaaaagatcaagttaaagaaatcattaattga
ttaaatgaatttgggattaaaaatgttggtgaattacatggagatttagatcctcgacaa
agaactaatatgcaaaaaagaatccaaaatatggagtttaagtgaattgtggcaagtgat
gttgctgcaaggggaattgatattgatggagttagtcacataatctcagttgatttacca
aaagatttagattactacattcacagaagtggaagaactgggcgaaatcagtatgatggt
caaagttatgtgttgttcaactcaaacaatcaacatcaaattgatactttaaaatcattg
ggaattgagttttcaaataaaaaacttgtcgataacaaccttgtagatatttatgaaaag
aaaaaagttaaagtaattaatactaattcacctggagctttagaagagaaaaagataatt
agtaaatacaaagcaaaaccagttaagccaggatataagaaaaaaagaaaagcagagatt
gagaaagttaaaaaagatattagaagaaaacacattaaagaatcaattgcaaagattaaa
aaagcaaaatacaaaaaacgtagagaagaaatatttaatgattaa
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