KEGG   Spiroplasma helicoides: SHELI_v1c04300
Entry
SHELI_v1c04300    CDS       T04620                                 
Symbol
hsdR
Name
(GenBank) type I restriction enzyme, R subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
shj  Spiroplasma helicoides
Brite
KEGG Orthology (KO) [BR:shj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:shj02048]
    SHELI_v1c04300 (hsdR)
Enzymes [BR:shj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SHELI_v1c04300 (hsdR)
Prokaryotic defense system [BR:shj02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SHELI_v1c04300 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like T1RH-like_C SNF2-rel_dom DEAD Helicase_C SH3BP4_C Transcrip_reg Phage_GPO
Other DBs
NCBI-ProteinID: AOG60381
UniProt: A0A1B3SKD0
LinkDB
Position
474126..477188
AA seq 1020 aa
MDNNFLIKEEKFENEIQNELEQLGWKVINEIDFKRRDNQEAINYNLLQKKLIELNQVSEK
IANLAIMEIRKNLDSLLEMNKTAHKHLTEGIQVYDDQENRYLTVKLISDKIDENTYNYVR
QFKVSNGANNRIPDITLFINGLPIVIMELKSPLALEGIEEAFNQNESLKIHNKTLWMFNV
LNFVSNRLITKYGSTTASLKHFYGWNKWDIDNNSNPIKFLFNKEMIYKIINVYTFYSDEN
AAIKYLAGPHQIQAVENTIIRLQNTNDNRGGVVWHTQGSGKSVTMVFLSKTIMKTFKQST
ILLVTDRNTLDEQLFKRFLNAQNYLRTTAVSINSRKDLIEKLDGKKHFGIYFMTVQKFTE
ETGVLSERDDIFILVDEAHRTQNNLDGEKKISKELKEFIIKFGYARYMRDAFPNAKITGF
TGTPLMKYDKDTRAVFGDYTHVYSMNDAVADGATVPIHYEMRKPKILLNDKYLAEMDKIQ
NEYINTLDPNDINSQQKIDTLLKSVNISQVLDDEQVIEAKSIDMLNHLKSREGLLNGKAM
IVANSRKGAFRYYSSILKNFPEYKDKVILVITESNKDTNPEMIDAIVKKRDVNQVASEFR
KPNSKYKVAIVVDMWLTGFDVPDLDVMYLDKILKWHNLMQAIARVNRTFEDPKTKKVKET
GLIVDYIGIWKFLADALIQYASGSGESLDINIEDVQKALEKLNELFMIVNDHYIKDLLKF
NELNSQERYNFIMKSLNSILELPVEEKNKFVKLARKSKRLFKIAYSSISENESTIAKCIE
IVNSLLTSTSIQRDINLALTIEALKKAIEKAIDTRVTDVEILESKLSKDINEVANILATE
AESLIKTAPRVALELLKHSIEAQIQQIERIRPFFAKMASEKLKEIIEKIEKIDDIQKVIE
LLKELAREIMYENNKELDFQDPQLQAFFEVISNDEYLHYNKNSEVLRQIAIDLMDSVKEN
FTDQFSNNPKVQTKVLIELKKILKTKYGYPPEKLGGLSGILIDRIKNEIKINESYFRKDD
NT seq 3063 nt   +upstreamnt  +downstreamnt
atggataataattttttaataaaagaagaaaagtttgaaaatgaaattcaaaatgaatta
gaacaattgggttgaaaagtcataaatgaaattgactttaaaagaagggacaatcaagaa
gcaataaattacaatttattgcaaaaaaagctgatagaacttaatcaagttagtgaaaaa
attgcaaacttagcaataatggaaatacgaaagaatctcgattctttattagagatgaat
aaaacagctcataagcatttgacagaaggaattcaggtttatgatgatcaagaaaataga
tacttaactgtaaaattaatctcagataaaatagatgaaaatacatataattatgttaga
cagtttaaagtttctaatggggcaaataataggatacctgacataactttattcattaat
ggtttaccaatagttataatggagttaaaaagtccacttgcattagaaggaattgaagaa
gctttcaatcaaaatgaatcattaaaaattcataataagactttatggatgtttaatgtt
ttaaattttgtaagtaatagattaattaccaagtatggatctactacagcaagtcttaaa
cacttttacggttgaaataaatgagatatagacaacaactctaatcctataaaattttta
tttaataaagaaatgatatacaaaattattaatgtgtatacattttactctgatgaaaat
gctgctattaaatatttagcaggaccacatcaaattcaggcagttgaaaatactattatt
aggttacaaaatactaatgacaatagaggtggtgttgtttgacatactcaaggttctgga
aaatcagtaactatggtatttttatctaaaacaataatgaaaacatttaaacaatcaaca
atactattggtaacagacagaaatactttagatgagcagttgtttaaaaggtttttaaat
gcacaaaactatctgagaacaacagctgtatctattaattcaagaaaagatttgattgaa
aaattagatggaaaaaaacattttggaatttattttatgactgttcagaagttcacagaa
gaaacaggtgttttatctgaaagagatgatatatttattttagtagatgaagcacataga
acacaaaataatctagatggtgaaaagaaaatatcaaaagagttaaaagaatttataata
aagtttggttatgcaagatatatgagggatgcatttcctaacgcaaaaattaccggattt
acaggaactccattaatgaaatacgacaaagacactagagctgtttttggggattataca
cacgtttattctatgaatgatgctgttgcagatggtgcaactgtaccaattcattatgaa
atgagaaagccaaagattttattaaatgataaatatcttgctgaaatggataaaattcaa
aatgagtatataaatactttagatccaaatgatataaattcacagcaaaaaatagatact
ttattaaaatctgtaaatatttctcaggttttagatgatgaacaagtaattgaagctaaa
tcaattgatatgctaaatcatcttaagtcaagagaaggtttgctaaatggtaaagctatg
atagttgcaaacagtagaaaaggggcttttagatattattcaagtattttaaaaaacttt
cctgaatataaagataaagtaatacttgtaataactgaatcaaataaagatactaaccct
gaaatgatagatgcaattgttaaaaaaagagacgtaaatcaagtagcttctgaatttaga
aaaccaaactcaaaatacaaggtagctattgttgttgatatgtggttaacaggttttgat
gttcctgatttagatgtaatgtatcttgacaagatattaaaatgacataatctaatgcaa
gcaatagcaagggtaaatagaactttcgaagaccctaaaactaaaaaagttaaagaaacc
ggtttgatagttgattatattggaatttgaaaatttttagctgatgctttaattcagtat
gcatcaggttctggtgaatcattagacataaatatagaagatgtccaaaaagctttagaa
aagttaaatgaactatttatgatagtaaacgatcactatataaaagatttattaaaattt
aatgaattaaattctcaagaaagatataattttataatgaaatcacttaatagcatactt
gagttacctgtagaagaaaaaaacaagtttgtaaagttggcaagaaaatcaaaaagatta
ttcaaaatagcttattcttcaatcagtgaaaacgaatcaactattgcaaaatgtatcgaa
atagtaaattcacttttaacctcaacaagcattcaaagagacataaatttagctttaact
attgaagcattaaaaaaagctattgaaaaagcaattgatacaagagttactgatgttgaa
attctagaatcaaagctttctaaagatataaatgaagtcgcaaacattttagcaacagag
gcagagtctcttattaaaacagcaccaagagtagctttagaattgttaaaacattcaata
gaagcacaaatacaacaaattgaaagaattagaccattttttgctaaaatggcttcagaa
aagttaaaagagataattgaaaaaatagaaaaaattgatgatattcaaaaagttattgaa
ttattaaaggaattagctagagaaataatgtatgaaaataataaagaacttgattttcaa
gatccacaattacaagcattttttgaagttatttcaaatgatgaatatttacattacaac
aaaaactcagaagtattaagacaaatagcaatagatttgatggattctgttaaagaaaat
tttacagatcaatttagcaataatccaaaagtgcaaactaaggttttaattgaattgaaa
aaaattttaaaaacaaagtatggttatccacctgaaaaacttggtggattatcaggtatt
ttaatagatagaataaaaaacgagatcaaaataaatgaaagctactttagaaaggatgat
taa

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