Spiroplasma helicoides: SHELI_v1c07490
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Entry
SHELI_v1c07490 CDS
T04620
Symbol
cbf
Name
(GenBank) 3'-5' exoribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
shj
Spiroplasma helicoides
Brite
KEGG Orthology (KO) [BR:
shj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shj03019
]
SHELI_v1c07490 (cbf)
Messenger RNA biogenesis [BR:
shj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SHELI_v1c07490 (cbf)
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Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_anti-codon
HD
tRNA_anti_2
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AOG60698
UniProt:
A0A1B3SL82
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All DBs
Position
complement(853858..854826)
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AA seq
322 aa
AA seq
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MWIKEINADSKSIEINSRVEKVILSTGNNGSNYLILNLVDKTGRIEARLWNCSEKDLELI
KEGEIIRVDGVVNVYRQQLQIKINSYHIIDPEEYLNYGINDDMFAITAPLNIDKGFEWLL
KTIEEVKNEVYRKITLSIIDDYLDEYKTYPAATSIHHNVIGGLFWHSFSLLKAAKNLQEI
YAYAQIDWDLVFCGAVLHDIGKVIEMKGKNASEYTDEGKLIGHISIGSMFVNAKSKEFNL
SDEQHQDAVKLQHIILASHGKHEYGSPVEPSLIEAIIVSSLDALDARIYRVNEELLKTEK
NGWTARIMTEDGRSFLKHFKKQ
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtgaattaaggaaataaacgcagatagcaaaagtattgaaataaactcaagagtagaa
aaggttatactttctacaggtaataatggttcaaattacttaatcttaaacttagtggac
aaaacaggcagaattgaagcaaggctttgaaattgctctgaaaaagatttagagttaata
aaagaaggggaaataattagagttgatggtgttgtaaatgtttatcgtcaacagctacaa
ataaaaatcaactcgtatcatattatagatcctgaagaatatttgaattatggtataaat
gacgatatgtttgcaataacagccccattaaatatagataaaggttttgaatggctttta
aaaaccatcgaagaagtaaaaaatgaagtatatcgaaaaattacattatcaataatagat
gattatttagatgagtataaaacttatcctgcagcaacctcaattcaccataatgtaata
gggggactattttgacacagtttttcattgctaaaagcagctaaaaatttgcaagaaata
tatgcttatgcacaaatagattgagatttagttttttgtggagctgttttgcatgatatt
ggtaaagttattgaaatgaagggtaagaacgcctctgaatatactgatgaagggaagtta
attggtcacatttcaataggaagtatgtttgttaatgcaaaaagtaaagaatttaatcta
tcagatgaacaacaccaagatgctgtcaaattacaacatatcattttagcgagtcatggg
aaacacgagtatggttctccagttgagccaagtttaattgaagctataatagtttcttca
cttgatgcacttgatgcaagaatttatagagtgaatgaagaactactaaaaacggaaaaa
aatggttgaacagcaagaattatgactgaagatggaagaagttttttaaagcattttaaa
aaacaataa
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