Spiroplasma helicoides: SHELI_v1c07950
Help
Entry
SHELI_v1c07950 CDS
T04620
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
shj
Spiroplasma helicoides
Pathway
shj03030
DNA replication
shj03410
Base excision repair
shj03420
Nucleotide excision repair
shj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SHELI_v1c07950 (polA)
03410 Base excision repair
SHELI_v1c07950 (polA)
03420 Nucleotide excision repair
SHELI_v1c07950 (polA)
03440 Homologous recombination
SHELI_v1c07950 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shj03032
]
SHELI_v1c07950 (polA)
03400 DNA repair and recombination proteins [BR:
shj03400
]
SHELI_v1c07950 (polA)
Enzymes [BR:
shj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SHELI_v1c07950 (polA)
DNA replication proteins [BR:
shj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SHELI_v1c07950 (polA)
DNA repair and recombination proteins [BR:
shj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SHELI_v1c07950 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SHELI_v1c07950 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
DUF4325
HHH
Motif
Other DBs
NCBI-ProteinID:
AOG60744
UniProt:
A0A1B3SLE1
LinkDB
All DBs
Position
complement(909515..912208)
Genome browser
AA seq
897 aa
AA seq
DB search
MKKNILLVDGNALIFRAFYSSYGRATLTTKEGIPTNAAYSFINMLLNIVQKNDYYDIKVA
FDKGKKTFRHDKLESYKAGRKKTPPELVSQFPIVREFLTEAKIDWYELDDYEADDIIGSI
AHILNNDSEYYVEILTSDQDMYQLISNNVVVISPQTGTSDLVVYDKHRLYEKWGISPEQV
IDYKGLRGDSSDNIKGVAGIGEKTAKELLQEYKTLDEIYKNIDSIKGAKQQKLIDGKEDA
FLSREIATIYKDIKNLDFTFKKVEIDFSNLKSFFAKYEMSSLIKRFGVTNEQEPQKIVNF
IKTNSWKNEYNAKKNFIYLETLNDNYHNPDIIGLGIVNDTGNYFYTFDSNEQRDIFNWQE
KSIDDTLQKFLNEKSFYTYDIKKIIYVLETLGYQINYNNFKYDFMIATYVLNSNVKSNFE
SQINSIDSTIEIKTFEEVFGKGVKKTKSLEDNVIADYLISRASLIKNTFEAIINKLKDNN
QFELYKKIELPFCFVLLDMEKEGVLIDKKELEIQTEYILGLLNDIEQKAQNLLKQNDIEP
INFASPKQLKELLYQKLKLPDRAKGSTDKEALDNLVGEHEIIDYILAIRKYSKLYSTYLK
GFEKFIYADNKVHTIYNQTLTNTGRLSSTDPNLQNISVRDDEQRNVRKIFICNDGYSYIS
FDYSQIELRVLADLADEKELISAYKNNLDIHEIAARNIFGVKNEDGVTSDQRRIAKVFNF
GILYGLTKFGLSKDLKITQKEAEQYIITYNKTFPEIENYKKEILKVGEELGYVETAANRR
RYIYELQSSNYMVREFGKRAAINAPIQGTAADILKIAMNNIYKELVSLKLETKIVAQIHD
EVILLVKDSEITQIETVVEKIMKNAYVDLLAIVNKNREPKVPLEVNKAIGKTWYDLK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatattttacttgtcgatggtaatgctttaatatttagagctttttatagt
tcttatggtagagccactttaacaacaaaagaaggtatccctacaaatgcagcatactca
tttattaacatgcttttaaatattgttcaaaaaaatgattattatgatattaaagtagca
tttgataaaggtaaaaaaacttttagacatgataagttagaaagttataaagctggtaga
aaaaaaacacctccagaactagtatctcagtttccaatagttagagaatttttgacagaa
gctaaaattgattgatatgagttagatgattatgaagctgatgacattattggatcaatt
gcacatattcttaataatgatagtgagtattatgtggaaatattaacaagtgatcaagat
atgtatcaactaatttcaaataatgtcgttgttatttcaccacaaaccggaacaagcgat
ttggttgtatatgataaacatagactttatgaaaaatgaggaatttcaccagaacaagtt
attgattataaaggtttacgtggagatagttcagataatataaaaggagttgctggaatt
ggagaaaagaccgccaaagaactacttcaagagtataaaactttggatgaaatatataaa
aatatagattctataaaaggggcaaaacagcaaaaactaattgatggaaaagaagatgct
tttttatctagagaaatagcaacaatttataaagatataaaaaacttggactttactttt
aaaaaagtagaaatcgatttttctaatttaaaaagcttttttgcaaaatatgaaatgagt
tctctaataaaaaggtttggagtaacaaatgaacaagaaccccaaaaaattgtaaatttt
attaagactaatagttgaaaaaatgaatacaatgcaaagaaaaattttatatatttagaa
actcttaatgataactatcataaccctgatattataggtttgggtatagttaatgatact
gggaactatttttacacttttgatagtaatgaacaaagagacatttttaattgacaagaa
aaaagtatcgatgatacattacaaaagtttttaaatgaaaaatcattttatacatatgat
ataaaaaaaattatttatgtattagaaactttaggttatcaaataaattacaacaatttt
aaatatgactttatgattgcaacatatgtattaaattcaaatgttaagtccaattttgag
tctcaaataaattctatcgattcaacaattgaaattaaaacttttgaagaagtttttggt
aaaggtgttaaaaaaactaaaagtttggaagacaatgttattgctgattacttaataagt
agagcaagtctaattaaaaatacgtttgaagcaataataaataaattaaaagataataat
cagtttgagctttataaaaaaattgaattgcctttttgttttgttctgttggatatggaa
aaagaaggtgttttaattgataaaaaagaattagaaatacaaactgaatatattttagga
ttacttaatgatatagaacaaaaagctcaaaatctattaaaacaaaatgacattgaacct
attaactttgctagcccaaagcaactaaaagaattactttaccaaaagttaaaattgcca
gatagagcaaaaggcagcacagataaagaagctttagacaatttggtgggtgaacatgaa
ataattgattatatcttggcaattagaaaatattcaaaactatacagcacttatcttaaa
ggttttgaaaagtttatttatgcagataataaagttcatacaatttataatcaaacactt
acaaatacaggaagactaagttcaacagatcctaatttacaaaatatctctgtaagggat
gatgaacaaagaaatgtaagaaaaatttttatatgtaatgatggatatagttacataagt
tttgattattcacaaatagaactaagagttttagcagacttggcagatgaaaaagagctt
ataagtgcatacaaaaacaatcttgacattcatgaaattgctgctagaaatatttttggt
gttaaaaatgaagatggtgtaacaagtgatcaaagaaggatagcaaaagtatttaacttt
ggtattttgtacggtcttaccaagtttggtttatctaaggatttaaaaataacacaaaaa
gaagctgaacaatatatcattacttacaataaaacatttccagaaatcgaaaactataaa
aaagaaattttaaaagttggtgaagagttaggttatgttgaaacggcagcaaatagacga
agatatatttatgagttacaaagtagtaattatatggttagagaattcggtaagagagct
gctataaatgcaccaatacaaggtactgctgcagatattttaaagatagctatgaataac
atctataaagaattagtgtctcttaaattggaaacaaaaatagttgcacaaattcatgat
gaagttattttattagttaaagacagtgaaattacacaaatagaaactgtagttgaaaaa
attatgaaaaatgcatatgtagatttattagcaattgtaaacaaaaatagagaacccaaa
gttcccttggaagtcaataaagcaattggtaaaacttgatatgacttgaaatag
DBGET
integrated database retrieval system
