Spiroplasma helicoides: SHELI_v1c10680
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Entry
SHELI_v1c10680 CDS
T04620
Symbol
pdhD
Name
(GenBank) pyruvate dehydrogenase E3 component
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
shj
Spiroplasma helicoides
Pathway
shj00010
Glycolysis / Gluconeogenesis
shj00020
Citrate cycle (TCA cycle)
shj00260
Glycine, serine and threonine metabolism
shj00280
Valine, leucine and isoleucine degradation
shj00620
Pyruvate metabolism
shj00630
Glyoxylate and dicarboxylate metabolism
shj00640
Propanoate metabolism
shj00785
Lipoic acid metabolism
shj01100
Metabolic pathways
shj01110
Biosynthesis of secondary metabolites
shj01120
Microbial metabolism in diverse environments
shj01200
Carbon metabolism
shj01210
2-Oxocarboxylic acid metabolism
shj01240
Biosynthesis of cofactors
Module
shj_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
shj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SHELI_v1c10680 (pdhD)
00020 Citrate cycle (TCA cycle)
SHELI_v1c10680 (pdhD)
00620 Pyruvate metabolism
SHELI_v1c10680 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
SHELI_v1c10680 (pdhD)
00640 Propanoate metabolism
SHELI_v1c10680 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SHELI_v1c10680 (pdhD)
00280 Valine, leucine and isoleucine degradation
SHELI_v1c10680 (pdhD)
00310 Lysine degradation
SHELI_v1c10680 (pdhD)
00380 Tryptophan metabolism
SHELI_v1c10680 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SHELI_v1c10680 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shj04147
]
SHELI_v1c10680 (pdhD)
Enzymes [BR:
shj01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SHELI_v1c10680 (pdhD)
Exosome [BR:
shj04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SHELI_v1c10680 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
Biotin_lipoyl
GIDA
AlaDh_PNT_C
FAD_oxidored
GCV_H
Biotin_lipoyl_2
RnfC_N
FAD_binding_2
HlyD_3
HlyD_D23
NAD_binding_8
HI0933_like
3HCDH_N
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-ProteinID:
AOG61015
UniProt:
A0A1B3SM59
LinkDB
All DBs
Position
complement(1224315..1226207)
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AA seq
630 aa
AA seq
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MFKVKFADIGEGLTEGTVGDILVKVGDKVKLNDPLFNVETDKVSSEIYAPVDGTIVKLNI
TPGQEIKVGEVVVEIDDGKGDAPEEPVKAASAEPAEENASVVGATPVSNDLLQRGRARAV
PPKGDSVLDKVNAALSDPKPVGIVPGNSKELKPAPKFNPSDPEKHFEVIMVGAGVGGYVG
AIKCAQLGLKTMIVEKDNFGGVCLNIGCIPTKTLLKSADLYEQITKHSEKYGIKVDLKGV
KADWELIQNRKKDVVSKLTMGVQGLLKKNKVTIVKGEAVALDKNTIQVGKDKYTCDNLII
ATGSVPNHMNLPGAEEAIKKGWLVDSTGALSLPEIPKSIVIIGGGVIGVEFACVYKRLGT
KVTILQFLPTILEMLDSDVSKEMTKELLNRGNLEIITEASTKEFKNGAVIYEKDGKTQTI
KADYCLQSVGRRTVTTGFENIGLNINERNHIVINEYCETNLDGVYAIGDVTGRMMLAHVA
SYQGLITANRIARRLGKSEAEDMVMNYDRVPSCIYTHPEVSMIGKTEDQLKKEGVEYKAY
KFPFAAIGKALADGNTVGFVKLICEPKYKQVLGAHIISNTATDMISEIGTLIESEGTITE
LAKAIHPHPTLSEAIGEAAEALEFGKPINF
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagtaaaatttgcagatattggagaaggtttaacagaaggtacagttggagat
attcttgttaaggttggagacaaagtaaaattaaacgacccattatttaatgttgaaaca
gataaagttagttctgaaatttatgcaccagttgatggaacaatcgtaaaattaaatatt
actccaggacaagaaattaaagttggagaagtagttgtagaaatcgatgatggtaaagga
gatgctccagaagaacctgtaaaagcagcttcagcagaaccagcagaagaaaatgcatca
gttgttggtgcaacacctgtatcaaatgacttattgcaaagaggaagagcaagagcagtt
ccaccaaaaggtgactcagttttagataaagtaaatgcagcattaagtgatccaaaacca
gtgggtattgttccaggaaactcaaaagaattaaaacctgcaccaaaatttaatccaagc
gatcctgaaaaacactttgaagtgataatggttggagctggagttggtggatatgttggg
gcaatcaaatgtgcacaattaggtttaaaaactatgattgttgaaaaagataattttggt
ggagtttgtcttaatattggatgtataccaacaaaaacacttttaaaatcagcagatcta
tatgaacaaattactaaacattcagagaaatatggaattaaagttgatttaaaaggtgta
aaagctgattgagaactaattcaaaatagaaaaaaagatgttgtttcaaaacttacaatg
ggagtacaaggacttcttaaaaagaacaaagtaactattgtaaaaggtgaagctgttgct
cttgataaaaatacaattcaagtaggtaaagacaaatatacttgtgataatctaattatt
gcaacaggtagtgtgccaaaccacatgaatttaccaggggcagaagaagcaattaaaaaa
ggttgattagtagattcaacaggagcactatcattaccagaaattccaaaaagtattgta
attattggtggaggagttattggtgttgagtttgcttgtgtttataaacgtttaggaaca
aaagttactattttacaattcctacctaccattttagaaatgcttgatagtgacgtttca
aaagaaatgacaaaagaattgctaaacagaggtaatcttgaaattataacagaagcatca
actaaggaattcaaaaatggagcagttatctatgaaaaagatggtaaaactcagactatt
aaagctgattattgtttacaatcagttggtagaagaactgtaacaacaggttttgaaaat
attggtttaaatattaacgaaagaaatcacattgttattaacgaatattgtgaaacaaac
cttgatggtgtatatgctattggggatgttacgggaagaatgatgttagcccatgttgca
tcatatcaaggtttaataactgcaaatagaattgcaagaagactgggaaaatcagaagca
gaagatatggttatgaactatgatagagttccaagttgtatatatactcacccagaagtt
tcaatgattggtaaaacagaagatcagttgaaaaaagagggtgttgagtataaagcctac
aaattcccatttgcagcaattggtaaagcattagctgatggaaatactgttggatttgtt
aaattaatttgtgaaccaaaatacaaacaagttttaggtgcgcatattatttcaaacact
gcaactgacatgatttcagaaataggtactttgattgaatcagaaggtacaattacagaa
cttgctaaagcaattcaccctcacccaaccttaagtgaagccatcggtgaagccgcagaa
gcacttgaatttggtaaaccaataaacttttaa
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