Streptomyces huasconensis: J2N69_03115
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Entry
J2N69_03115 CDS
T07920
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
shk
Streptomyces huasconensis
Brite
KEGG Orthology (KO) [BR:
shk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shk03021
]
J2N69_03115
Transcription machinery [BR:
shk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J2N69_03115
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_Crp_2
HTH_23
DUF1492
MarR
MarR_2
DUF134
HTH_37
HTH_Tnp_4
HTH_3
GerE
DUF5397
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UFQ14087
LinkDB
All DBs
Position
707852..708694
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AA seq
280 aa
AA seq
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MATTTQAVTASEHLPQITAPQSVAPQDARALSKLFFGRLATVEEGTAEYQYVRNTLIEMN
MSLVRYAAGRFRNRADDMEDIVQVGMIGLIKAIDRFELSRDTQFATFAVPYIVGEIKRFF
RDTSWAVHVPRRLQEARVELAKATEELSTRLGRAPRVAELAALMDLTEDEVVEAQVAANG
YHSTSLDAAVHGDPDEGEAALADFIGEEDRALELVEDFHTLAPLIAGLEERDREILRLRF
VDELTQSQIGDRLGVSQMHVSRLLTRTLKRLRAGMLTPAG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccacgcaggctgtgaccgcaagcgagcacttgccgcagatcaccgcaccg
cagtcagtggcgccgcaggatgcccgagctctgtcgaagctgttcttcggccggctcgcc
acggtggaggaaggcaccgccgagtaccagtacgtgcggaacaccctgatcgagatgaac
atgtcgctggtccgctacgcggccggacgcttccggaaccgggccgacgacatggaggac
atcgtccaggtcggcatgatcggtctgatcaaggccatcgaccgtttcgagctgtcccgc
gacacccagttcgccaccttcgcggtgccgtacatcgtcggcgagatcaagcggttcttc
cgtgacacctcctgggcggtgcacgtcccgcgccgcctccaggaggcccgggtggagctg
gccaaggccacggaggagctgagcacgcggctgggccgcgcccctcgggtcgccgaactg
gccgccctcatggacctgaccgaggacgaggtcgtcgaggcccaggtggccgccaacggc
taccactccacctccctggacgcggccgtgcacggtgaccccgacgagggcgaggcggcc
ctcgcggacttcatcggggaggaggaccgcgcgctggagctcgtggaggacttccacacg
ctggcgcctctgatcgccggactcgaggagcgcgaccgggagatcctgcggctgcggttc
gtcgacgagctgacgcagtcgcagatcggtgaccgcctcggcgtctcgcagatgcacgtc
tcccggttgctgacccgcacgctgaagcgcctgcgtgcgggcatgctcacccctgccggg
tga
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