Streptomyces huasconensis: J2N69_03460
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Entry
J2N69_03460 CDS
T07920
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
shk
Streptomyces huasconensis
Brite
KEGG Orthology (KO) [BR:
shk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shk03021
]
J2N69_03460
Transcription machinery [BR:
shk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J2N69_03460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_23
HTH_37
DUF7343
MarR_2
Sigma70_ECF
HTH_3
MarR
KORA
ApoB100_C
HTH_28
Prp19
Motif
Other DBs
NCBI-ProteinID:
UFQ14151
LinkDB
All DBs
Position
complement(789287..790183)
Genome browser
AA seq
298 aa
AA seq
DB search
MFVRTIDEYQGVGQGFGPAEGAADARVPLPRIDASEVAPKDARELSKLFFDRLGALEEGT
PEHTYTRDTLIEMNLSLVHYVAGRFRHRGSGQLEDIVQVGTVGLIKAIDRFDMSRGHEFV
SFAVPCILGEIKRHFRDTSWAVHVPRRLQELRTQLSQSQEKLSSALGREPTVKELAADLK
VTEEQALEAIVAANGYAAGSLDAPHGSAEEGETYRSGRSLADVMGAPDPAIEVFEHLHAL
APLLAELGERERRIIELRFGQEMTQAEIGAALGISQMHVSRLLSRTLAELRTGLLTHE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcggaccatcgatgagtaccagggcgtcggacagggcttcgggccggccgag
ggagcagcggacgcgcgggtgccgctgccgcggatcgacgcctccgaggtcgcgccgaag
gacgcgcgggagctgtccaagctcttcttcgaccggctcggggcactggaggagggcacg
cccgagcacacgtacacgcgcgacaccctcatcgagatgaacctctcgctggtgcactac
gtggcgggccgcttccgccatcgcggcagcggccagctggaggacatcgtccaggtcggg
accgtgggcctgatcaaggcgatcgaccgcttcgacatgagccgcggccacgagttcgtc
tcgttcgcggtgccctgcatcctcggcgagatcaagcgccacttccgggacaccagctgg
gccgtgcacgtaccgcgcaggctccaggaactccgtacgcaactctcgcagtcccaggag
aagttgagttccgcgctcggccgcgagcccaccgtcaaggaactcgcggccgacctgaag
gtgaccgaggaacaggcgctggaggcgatcgtcgccgccaacggctacgcggccgggtcc
ctggacgccccgcacggttcggccgaggagggcgagacgtaccgcagtggccgttcgctc
gcggacgtcatgggcgcccccgaccccgccatcgaggtcttcgagcacctccacgccctg
gcaccgctcctggcggaactcggcgagcgggagcgccgcatcatcgagctgcgcttcggc
caggagatgacccaggccgagatcggcgccgccctcggcatctcgcagatgcacgtgtcc
cggctgctctcacgcaccttggccgagctgcgcacgggcctgctcacgcacgaatag
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