Streptomyces huasconensis: J2N69_07535
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Entry
J2N69_07535 CDS
T07920
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shk
Streptomyces huasconensis
Pathway
shk03030
DNA replication
shk03430
Mismatch repair
shk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J2N69_07535
03430 Mismatch repair
J2N69_07535
03440 Homologous recombination
J2N69_07535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shk03032
]
J2N69_07535
03400 DNA repair and recombination proteins [BR:
shk03400
]
J2N69_07535
Enzymes [BR:
shk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J2N69_07535
DNA replication proteins [BR:
shk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J2N69_07535
DNA repair and recombination proteins [BR:
shk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J2N69_07535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
DEDDh_C
PTCB-BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UFQ14869
LinkDB
All DBs
Position
1684673..1685668
Genome browser
AA seq
331 aa
AA seq
DB search
MLEDRTTAASAAPWPAAYPTGYAVVDVETTGLARDDRIVSAAVYRVGAQGEIEDHWYTLV
NPRRDPGPVWIHGLTSDVLASAPLFEEIAEEFASRLEGRVLVAHNAVFDWSMIAREYARA
ERTAPVRQRLCTIALAKELALPLPNHKLESLAAHFGVEQRHAHNALDDARVLAEAFRPSL
LAAAGGNVRLPLLECRPLTEWSDGVPRIGRQSTGPTPSASYRPGSWRPSRKRPPCPYPNP
GRYETGKPLKQGMRVAFSGDTSVERDLLEDRAVEAGLHIATSVSRLTSLLVTNDPDSGTS
KTVKARSFGTPVVDEAAFGQLLQDVAPATDG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagaccgcacgaccgcagcgtccgccgccccctggccggccgcgtatccaacg
gggtacgcggtcgtcgacgtggagaccaccggactggcccgcgacgaccgcatagtgtcg
gcggccgtctaccgggtgggcgcccagggggagatcgaggaccactggtacacgctggtc
aacccccggcgcgacccggggcccgtgtggattcacggcctcaccagtgacgtgctcgcg
agcgcgcccctgttcgaggagatcgccgaggagttcgcgagccgcctcgaaggacgcgtc
ctggtcgcgcacaacgccgtcttcgactggtcgatgatcgccagggagtacgcgcgcgcg
gagcgcaccgcccccgtgcgccagcggctgtgcaccatcgcgctcgccaaggagctggcg
ctcccgctgcccaaccacaagctggagtccctggccgcgcacttcggggtcgagcagcgc
cacgcgcacaacgccctggacgacgcgcgcgtgctcgccgaggcgttccgcccgagcctg
ctcgcggcggccggcggcaatgtgcgcctgccgctcctggagtgccgcccgctcaccgag
tggtccgacggggtgccccgcatcggccgccagtcgaccggaccgacgccctccgcgtcg
taccggcccgggagttggcgcccctcgcgcaagcggccgccgtgcccgtacccgaacccc
gggcggtacgaaacgggcaaaccgctcaagcagggcatgcgggtcgcgttctccggggac
acctccgtggagcgcgacctcctggaggaccgggcggtcgaggcgggcctgcacatcgcg
acgagtgtgtcccgtctcaccagcctcctcgtcacgaacgacccggactcgggcacctcc
aagaccgtcaaggcgcgctccttcggcacaccggtcgtcgacgaggccgccttcgggcag
ctcctccaggacgtggcaccggccacggacgggtga
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