Streptomyces huasconensis: J2N69_08815
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Entry
J2N69_08815 CDS
T07920
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
shk
Streptomyces huasconensis
Pathway
shk03030
DNA replication
shk03430
Mismatch repair
shk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J2N69_08815 (dnaE)
03430 Mismatch repair
J2N69_08815 (dnaE)
03440 Homologous recombination
J2N69_08815 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shk03032
]
J2N69_08815 (dnaE)
03400 DNA repair and recombination proteins [BR:
shk03400
]
J2N69_08815 (dnaE)
Enzymes [BR:
shk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J2N69_08815 (dnaE)
DNA replication proteins [BR:
shk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J2N69_08815 (dnaE)
DNA repair and recombination proteins [BR:
shk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J2N69_08815 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
UFQ15095
LinkDB
All DBs
Position
complement(1958430..1961972)
Genome browser
AA seq
1180 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFKACNEMGMTHIAMSDHGNLHGAYDFFHSAQKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANKTGLHNLFRL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGELQTRLRLGQYDEALKSAAEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLDIGKKLGIPPLVTNDSHYTYAHESTAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQEGCRNTLLVAEQIDTTGMFEKRD
LMPKFDIPEGFTEVTWFQEEVRRGMERRYPGGVPEDRQKQAEYEMDIIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPITHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLDGITNPSHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGIELEMLSLPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHTNYAERKNGRQEITPIHPELEEPLKETLGLTYGLIVYQEQVQKAAQIVAG
YSLGEADILRRVMGKKKPEELEKNFVLFQAGARKNGYSDEAIQALWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
VHNFAAQGDDVILFGLEAVRNVGTNVVESIIRSRKAKGKFTSFPDYLDKVEAAACNKRTT
ESLIKAGAFDTMGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGDETGGDEPGFG
LDVEFSEDEWEKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIGQLTGGDFSDGSV
VTIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGR
LDKREDVPRLVAMELQVPDLSNAGANAPVIITIPTVKVSPPMVHRLGEVLSHHRGNSEVR
IKLQGAQKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgcccttcacgcacctgcacgtgcacacccagtactcgctgcttgacggt
gccgcgcggctcaaggacatgttcaaggcgtgcaatgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctccacggcgcgtacgacttcttccactccgcgcagaaggcg
ggcgtgacgccgatcatcgggatcgaggcgtatgtggcgccggagtcgcggcgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgtgacgacgtctccggttccggtggt
tacacccacaagacgatctgggcggcgaacaagacgggcctgcacaacctcttccgcctc
tcctcggacgcgtacgccgagggctggctccagaagtggccccgcatggacaaggagacg
atctcccagtggtcggaggggctcatcgcctccaccggctgcccctcgggtgagctgcag
acccggctgcgtctgggccagtacgacgaggcgctgaagtcggccgcggagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgggtccgcgacggcctcctggacatcggcaagaagctcggcatcccgcccctggtgacg
aacgactcgcactacacgtacgcgcacgagtcgaccgcccacgacgccctgctctgcatc
cagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcaccggttactac
ctgaagtcgaccgacgagatgtacgcgatcgactcctcggacgcctggcaggagggctgc
cgcaacacgctcctggtcgccgagcagatcgacaccaccgggatgttcgagaagcgcgac
ctgatgccgaagttcgacatcccggagggcttcaccgaggtcacctggttccaggaggag
gtccgccgcggcatggagcgccgctatccgggcggcgtccccgaggaccgccagaagcag
gccgagtacgagatggacatcatcatccagatggggttcccggggtacttcctggtcgtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtgggccccggccgaggctcc
gcggccggctcgatcgtcgcgtacgccatgggcatcaccgacctcgacccgatcacgcac
ggtctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcctgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatcaggtacgtgacggagaaatacggcgcc
gacaaggtcgccatgatcggcacgtacggaaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctcggatatccgtacgcgatgggcgaccgcctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctcgacggcatcaccaacccctcgcacccgcgc
tacagcgaggcgggcgagatccgggggatgtacgagaacgaaccggacgtcaagaaggtc
atcgacaccgccaagggcgtggagggcctggtccggcagatgggtgtgcacgcggccggc
gtgatcatgtccagcgagccgatcgtcgaccacgccccgatctgggtgcgccacaccgac
ggcgtcaccatcacgcagtgggactacccccagtgcgagtcgctcggcctgctcaagatg
gacttcctgggcctgcgcaacctcaccatcatggacgacgccgtcaagatggtgaaggcc
aacaagggcatcgagctggagatgctctccctcccgctcgacgacccgaagaccttcgaa
ctgctctgccgcggtgacacgctcggcgtcttccagttcgacggcggcccgatgcgctcc
ctgctgcgccagatgcagcccgacaacttcgaggacatttccgccgtctcggccctgtac
cggccgggcccgatgggcatgaactcgcacacgaactacgccgagcgcaagaacggccgc
caggagatcacgccgatccacccggagctcgaagagcccctgaaggagacgctcggcctc
acctacggcctcatcgtgtaccaggagcaggtgcagaaggccgcccagatcgtcgcgggc
tacagcctcggcgaagccgacatcctgcgccgcgtgatgggcaagaagaagcccgaggag
ctggagaagaacttcgtcctcttccaggcgggcgcccggaagaacggctactccgacgag
gccatccaggccctgtgggacgtcctggtccccttcgccggctacgccttcaacaaggcg
cactcctccgcgtacggcctggtcacctactggaccgcctacctgaaggcgaactacccg
gccgagtacatggccgcgctgctcacctcggtgaaggacgacaaggacaagtcggccgtc
tacctcaacgagtgccgccgcatgggcatcaaggtcctcccgccgaacgtgaacgagtcc
gtgcacaacttcgccgcccagggcgacgacgtgatcctcttcggcctggaggcggtccgc
aacgtcggtacgaacgtggtggagtcgatcatccgttcgcgcaaggccaaggggaagttc
acctccttccccgactacctcgacaaggtcgaggcggccgcctgcaacaagcgcaccacg
gagtcgctcatcaaggcgggcgcgttcgacaccatgggccacacccgcaagggcctgacc
gcgcagtacgagccgatgatcgacaacgtggtcgcggtgaagcgcaaggaggccgagggc
cagttcgatcttttcgggggcatgggcgacgagaccggcggcgacgagccgggcttcggt
ctcgacgtggagttctccgaggacgagtgggagaagacgtacctgctcgcccaggagcgc
gaaatgctcggcctgtacgtctccgaccacccgctcttcggcctggagcacgtgctctcc
gacaaggctgacgcgggcatcggccagctcaccggcggggacttctccgacggctcggtg
gtcaccatcggcggcatcatctccggcctccagcgcaagatgaccaagcagggcaacgcc
tgggcgatcgccaccgtcgaggatctcgccggctccatcgagtgcatgttcttccccgcg
acctaccagctggtgtcgacccagctcgtcgaggacgccgtggtcttcgtcaagggccgc
ctcgacaagcgcgaggacgtgccgcggctcgtcgcgatggagctgcaggtccccgacctg
tcgaacgcgggcgccaacgcacccgtgatcatcaccatcccgaccgtcaaggtgagtccg
ccgatggtccaccggctcggcgaggtcctcagccaccaccgcggcaacagcgaggtgcgg
atcaagctgcaaggggcgcagaagaccacggtgctgcggctcgaccggcaccgcgtgaag
ccggacccggcgctcttcggcgacctgaaggtgctgctcggcccgtcctgcctggcgggc
tga
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