Streptomyces huasconensis: J2N69_13120
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Entry
J2N69_13120 CDS
T07920
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
shk
Streptomyces huasconensis
Brite
KEGG Orthology (KO) [BR:
shk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shk03400
]
J2N69_13120
DNA repair and recombination proteins [BR:
shk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
J2N69_13120
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
UFQ15858
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All DBs
Position
2915578..2916063
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AA seq
161 aa
AA seq
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MKEEDTTPSQPTWTPPPGSWASSAARRRNMQAIRSRDTKPERLIRSLLHAQGLRYRVAAK
PLPGLRRTADIVFRPAKLAVFVDGCYWHGCPEHYVSPKTNSGYWSDKVARNMARDRDTEA
QLREAGWTVLRFWEHEPPEDCAVKIAATAIHLRAARREDHN
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagaagacacgacgccgagtcaaccgacatggacgccgccccctggatcctgg
gcgtcttcagccgccagacgccgcaacatgcaggccatccgcagccgtgacaccaagcct
gaacggttgatccgcagcctcctccatgcgcaggggctccgctaccgggtagcagcaaag
ccgctgcccgggcttcgccggacggcagacattgtcttccgcccggcgaagctggcggtg
tttgtagatggctgctattggcacggatgcccggaacactacgtctcaccgaaaaccaat
tcgggctactggtcggacaaggttgcccgcaacatggctcgcgatcgcgacacagaggcg
cagctcagggaggcaggatggaccgtactccggttctgggagcatgagcctcccgaagac
tgcgccgtcaagatcgcggcgacagcgatacatctacgggcagccagacgcgaggatcat
aattaa
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