Streptomyces huasconensis: J2N69_21665
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Entry
J2N69_21665 CDS
T07920
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
shk
Streptomyces huasconensis
Pathway
shk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J2N69_21665 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shk03019
]
J2N69_21665 (recQ)
03400 DNA repair and recombination proteins [BR:
shk03400
]
J2N69_21665 (recQ)
Enzymes [BR:
shk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J2N69_21665 (recQ)
Messenger RNA biogenesis [BR:
shk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J2N69_21665 (recQ)
DNA repair and recombination proteins [BR:
shk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J2N69_21665 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
HHH
Motif
Other DBs
NCBI-ProteinID:
UFQ17394
LinkDB
All DBs
Position
4740009..4741994
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AA seq
661 aa
AA seq
DB search
MSEVTESDALRTLHRVFGYDAFRGEQEAIIDHVVAGGDAVVLMPTGGGKSLCYQIPALVR
PGTGIVVSPLIALMQDQVDALRALGVRAGFINSTQDFDERRVMEAEFLAGELDVLYLAPE
RLRLDATLDLLSRGKISVFAIDEAHCVAQWGHDFRPDYLTLSVLGQRWPDVPRIALTATA
THATHREITERLGMPDAKHFVASFDRPNIQYRIVPKAEPKKQLLAFLKEEHAGDAGIVYC
LSRNSVEKTAEFLCRNGIEAVPYHAGLDGGTRAAHQSRFLREEGLVVCATIAFGMGIDKP
DVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLQDVVQQRKMIQGSEGDEAFRR
RAASHLDSMLALCETAQCRRAQLLTYFGQEATAQSCGNCDTCLTPPETWDGTVAAQKVLS
AVVRLQRERGQKFGAGQIIDILLGKKTAKVIQFDHDQLSVFGIGEELAEAEWRGVIRQLL
AQGLLAVEGEYGTLVLTETSGSVLGREREVRLRKEPKRVPAARAARGERKAKSAAAVADL
PQEAVPLFEALRAWRGAQAKEQGVPAYVIFHDATLREIATLRPTSVADLAGISGVGEKKR
ATYGEGVVGVVAEFAGGDAPEGGASGDSAAGPAAAARAAEPQLSDDVEPDWGDEMEPDWT
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtgacggagagcgacgcgctgcggacgctccatcgcgtcttcgggtacgac
gccttccgaggtgagcaggaggcgatcatcgatcatgtggtcgccggcggggacgccgtc
gtcctcatgcccaccggcggcggaaagtccctctgctatcagatccccgccctggtcaga
ccgggcacgggcatcgtggtctcgccgctgatcgcgctcatgcaggaccaggtggacgcg
ttgcgggcgctcggcgtgcgcgccggcttcatcaactccacgcaggacttcgacgagcgg
cgcgtgatggaggcggagttcctcgcgggggagctggacgtgctctatctcgccccggag
cggctgcgcctggacgccaccctggacctcctgtcgcggggcaagatctccgtcttcgcc
atcgacgaggcgcactgcgtggcgcagtggggccacgacttccggcccgactacctcacg
ctctccgtgctcgggcagcgctggccggacgtgccccgcatcgccctgacggcgacggcc
acgcacgcaacgcaccgggagatcaccgagcggctcggcatgccggacgccaagcacttc
gtggcgagcttcgaccggcccaacatccaataccgcatcgtgcccaaggccgaaccgaag
aagcagctgctggccttcttgaaggaggagcacgcgggcgacgcgggcatcgtctactgc
ctctcgcggaactccgtcgagaagaccgccgagttcctctgccggaacggcatcgaggcc
gtcccgtaccacgcgggtctcgacggcggcacgcgcgcggcgcaccagtcccgcttcctg
cgcgaggagggactcgtcgtctgcgccacgatcgcgttcggcatgggcatcgacaagccg
gacgtccgcttcgtcgcccacctcgacctgcccaagtcggtcgaggggtactaccaggag
acgggccgcgcgggccgtgacggcctgccctcgacggcctggatggcgtacggcctccag
gacgtcgtccagcagcggaagatgatccagggcagtgagggcgacgaggcgttccggcgc
cgcgccgcctcgcacctggactcgatgctggcgctctgcgagaccgcgcagtgccgccgc
gcccagctcctcacctacttcggccaggaagcgacggcgcagtcgtgcggcaactgcgac
acgtgcctgaccccgcccgagacctgggacggcacggtcgccgctcagaaggtgctctcc
gcggtggtgcggctccagcgggagcgcggccagaagttcggcgcggggcagatcatcgac
atcctgctcggcaagaagaccgcgaaggtcatccagttcgaccacgaccagctctccgtc
ttcggcatcggagaggagctggcggaggctgagtggcggggcgtcatacgccagttgctg
gcacagggcctgctcgcggtcgagggggagtacggcacgctggtgctcaccgagacgagc
gggtccgtgctgggccgggagcgcgaggtgcggctgcgcaaggagccgaagcgggtcccg
gcggcgcgggccgccaggggtgagcgcaaggcgaagtcggcggcggccgtcgccgacctg
cctcaggaggccgtgccgctcttcgaggcgctgcgcgcctggcgcggcgctcaggccaag
gagcagggcgtcccggcgtatgtgatcttccatgacgccacgctgcgcgagatcgccacg
ctgcggccgacgtccgtggcggacctcgcgggcatcagcggcgtgggcgagaagaagcgg
gcgacgtacggcgagggcgtggtcggggtcgtcgcggagttcgcgggtggggacgccccg
gagggcggggcttccggtgactcggcggcgggcccggcggctgcggcgcgggcagccgag
ccgcagctcagtgacgacgtggagccggactggggggacgagatggagccggactggacg
tcgtga
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