Streptomyces huasconensis: J2N69_22480
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Entry
J2N69_22480 CDS
T07920
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shk
Streptomyces huasconensis
Pathway
shk03420
Nucleotide excision repair
shk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J2N69_22480 (pcrA)
03430 Mismatch repair
J2N69_22480 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shk03400
]
J2N69_22480 (pcrA)
Enzymes [BR:
shk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J2N69_22480 (pcrA)
DNA repair and recombination proteins [BR:
shk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J2N69_22480 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
J2N69_22480 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
DEAD
ResIII
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UFQ17543
LinkDB
All DBs
Position
4899631..4902135
Genome browser
AA seq
834 aa
AA seq
DB search
MSSLFDDSFLADLQPSRAADEEPPPPPEDSAPEPVPDDLFSGKFDVPMTRDTHYRDGAPR
PVIDPATLLEGLNENQRAAVVHAGSPLLIVAGAGSGKTRVLTHRIAYLLAQRGVHPGQIL
AITFTNKAAGEMKERVEQLVGPRANAMWVSTFHSACVRILRREYKKLGFTSSFSIYDAAD
SKRLMALVCRDLDLDPKKFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAMY
QSRLREANALDFDDLIMTTVHLLRAFPDVAEHYRRRFRHVMVDEYQDTNHAQYALVRELV
GPSGGEGDDPAELCVVGDADQSIYAFRGATIRNILQFEEDYTDATTILLEQNYRSTQTIL
SAANAVIERNESRRPKNLWTNQGAGARITGYVADTEHDEAQFVADEIDRLTDAGEAKAGD
VAIFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDAVPLRR
ILNVPKRGIGDRAEAMIDALAQREKISFPQALRRVDEAYGMAARSTNAVRRFNTLMEELR
TIVESGAGPAVVLEAVLERTGYLAELQASTDPQDETRIENLQELAAVALEFEQENAQAAG
AQEDGQAEADEGAVAPAGTLSDFLERVALVADSDQIPDEEDDGSGVITLMTLHTAKGLEF
PVVFLTGMEDGVFPHMRALGQVKELEEERRLAYVGITRARERLYLTRSSMRSAWGQPSYN
PPSRFLEEIPDTYLDWKRKGSVGALASSGPAAGIASSLSSSRSRTGGAQGFATRRASEKP
VVSLAIGDRVTHDQFGLGTVVGVKGTGANAEATVDFGEPKPKRLLLRYAPVEKL
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgatgacagcttcctggcggacctgcagccttcccgggccgcggac
gaagagcccccgccgccgcccgaggacagcgctccggaaccggttccggacgacttgttc
agcgggaaattcgacgtgcccatgacccgggacacgcactaccgcgacggcgccccgcgc
ccggtcatcgacccggcgacgctcctggaggggctgaacgagaaccagcgcgcggcggtc
gtgcacgccggctccccgctgctcatcgtcgccggtgccggttccggcaagacccgcgtg
ctgacccaccgcatcgcgtacctcctcgcgcagcgcggtgtgcaccccgggcagatcctc
gcgatcaccttcacgaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctcgtg
ggcccccgggccaacgcgatgtgggtctcgaccttccacagcgcctgtgtccgcatcctg
cgccgcgagtacaagaagctcggcttcacgtcctccttctcgatctacgacgccgcggac
tccaagcgtctgatggccctggtctgccgcgacctggacctcgacccgaagaagttcccg
ccgaagtccttcagcgccaagatctccaacctgaagaacgagctgatcgacgaggaggac
ttcgccgcccaggccgccgacggcttcgagaagaccctcgcccaggcctacgccatgtac
cagtcgcgcctgcgcgaggcgaacgcgctggacttcgacgacctgatcatgacgacggtg
cacctcctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcacgtc
atggtcgacgagtaccaggacacgaaccacgcgcagtacgccctggtgcgcgagctggtc
ggcccctccggaggcgagggcgacgatccggccgagctgtgcgtggtgggtgacgccgac
cagtcgatctacgccttccgcggcgccaccatccgcaacatcctccagttcgaggaggac
tacaccgacgccaccacgatcctcctggagcagaactaccgctccacgcagacgatcctg
agcgccgcgaacgcggtcatcgagcggaacgagagccgccgcccgaagaacctctggacc
aaccagggcgcgggcgcccgtatcaccggctatgtggccgacaccgagcacgacgaggcg
cagttcgtcgccgacgagatcgaccggctcacggacgcgggcgaggcgaaggccggcgac
gtcgcgatcttctaccgcacgaacgcccagtcccgcgtcttcgaagagatcttcatccgc
gtcggcctgccctacaaggtcgtcggcggcgtccgcttctacgagcgcaaggaggtccgc
gatgtgctggcctacctgcgcgttctcgccaaccccgaggacgcggtcccgctgcgccgc
atcctgaacgtccccaagaggggcatcggcgaccgcgccgaggcgatgatcgacgcgctg
gcgcagcgcgagaagatctccttcccgcaggcgctgcgccgcgtcgacgaggcgtacgga
atggcggcccgttcgaccaacgccgtcaggcggttcaacacgctcatggaggagctgcgg
accatcgtcgagtccggcgcgggcccggccgtcgtcctggaggccgtgctcgaacggacc
ggctacctcgcggagttgcaggcctcgacggacccgcaggacgagacccgcatcgagaac
ctccaggaactcgccgcggtcgcgctggagttcgagcaggagaacgcccaggcggccggt
gcccaggaggacggccaggcggaagccgacgagggggccgtcgctccggccggcacgctc
tccgacttcctggagcgcgtcgcgctcgtcgccgactccgaccagattccggatgaggag
gacgacggctccggagtcatcaccctcatgacgctgcacaccgcgaagggccttgagttc
ccggtggtgttcctgaccggcatggaggacggcgtcttcccgcacatgcgcgctctcggg
caggtcaaggagctggaggaggagcgccgcctggcctacgtgggcatcacccgcgcgcgc
gagcggctctacctcacgcggtcctcgatgcgcagcgcctggggccagccctcgtacaac
ccgccgtcgcgcttcctggaagagattccggatacgtatctggactggaagcggaagggc
tccgtcggcgccctcgcgtcgtcgggtcccgccgcgggcatcgcctcgtcgctgtcctcc
tcgcgctcgcgcacgggcggggcgcagggcttcgccacccgccgcgcctcggagaagccg
gtggtctcactggcgatcggggaccgggtcacgcacgaccagttcggtctcgggaccgtg
gtcggggtgaagggcacgggtgcgaacgccgaggcgacggtggacttcggcgagcccaag
ccgaagcggctcctgctgcggtacgcgccggtcgagaagctgtaa
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