Streptomyces huasconensis: J2N69_25285
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Entry
J2N69_25285 CDS
T07920
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
shk
Streptomyces huasconensis
Pathway
shk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
shk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
J2N69_25285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shk03400
]
J2N69_25285
DNA repair and recombination proteins [BR:
shk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
J2N69_25285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
UFQ18044
LinkDB
All DBs
Position
5512038..5513258
Genome browser
AA seq
406 aa
AA seq
DB search
MRSIWNGAISFGLVSIPIKLVNATENHSVSFRQIHTEDGGRIRYRKVCELEEREVTSAEI
GKGYEDADGSIIPITDEDLAALPIPTAKTIEIVAFVPEDRIDPLQIDAAYYLSANGVPAA
KPYTLLREALKRSQKVAIAKYALRGRERLGMLRVVDDVIAMHGLLWPDEIREPEGVAPEA
QVTVRDAELDLADALMDTLGEVDMATLHDDYRAAVEELIATKVEGGAPAEKAPAGEAGGG
KVIDLMAALENSVRAARTARGEAAGSDESAEAGASTGSGAEAEVTRLGDRRAKKASSSAS
PSPSARKTASARGSAPAAPKEVGGKKSTSTAAKKKDAPAKKAATKSTATARKATAGKAET
GKAGTGRAAAGKATAGKTAAKTSAKKTAQKKSEPAKKTAAKRRASA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
gtgcgatccatatggaacggtgcgatctccttcggcctggtcagcatcccgatcaagctc
gtgaacgccaccgagaaccactcggtctccttccgccagatccacacggaggacggcggc
aggattcgctaccgcaaggtgtgcgagctggaggagcgcgaggtgacctcggcggagatc
ggcaaggggtacgaggacgcggacggctcgatcatcccgatcacggacgaggacctggcc
gcgctgccgatcccgacggccaagacgatcgagatcgtcgccttcgtcccggaagaccgc
atcgacccgctccagatcgacgcggcgtactacctctcggcgaacggcgtccccgccgcc
aagccgtacaccctgctgcgcgaggcgctcaagcggagccagaaggtggccatcgccaag
tacgcgctgcggggccgggagcggctcggcatgctccgcgtggtcgacgacgtgatcgcg
atgcacggactgctgtggccggacgagatccgggagccggagggcgtggcacccgaggcc
caggtcacggtccgcgacgccgaactggacctggcggacgcgctgatggacaccctcggt
gaggtcgacatggccacgctccacgacgactaccgcgcggcggtcgaggaactcatcgcc
acgaaggtcgagggcggggcccccgccgagaaggccccggccggcgaggcgggcggcggc
aaggtcatcgacctgatggcggccctggagaacagcgtccgcgccgcccgcaccgcccgc
ggggaggccgcgggctccgacgagtcggccgaggccggggcgtccaccgggtccggggcg
gaggcggaggtcacccggctgggggaccgccgcgccaagaaggcctcgtcgtccgcgtcg
ccttcgccgtcggcgcgcaagacggcttcggcgcgcgggtcggcgcccgccgcccccaag
gaggtcggcggcaagaagtcgacgtcgaccgcggcgaagaagaaggacgccccggccaag
aaggcggcgacgaagtccacggcgacggcccgcaaggcgacggcggggaaggccgagacg
ggcaaggcgggcacgggcagggcggccgcgggcaaggcgacggcgggcaagacggcggcc
aagacctcggccaagaagacggcccagaagaagtcggagccggcgaagaagaccgcggcg
aagcgccgcgcctcggcctga
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