Streptomyces huasconensis: J2N69_27460
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Entry
J2N69_27460 CDS
T07920
Name
(GenBank) HAMP domain-containing protein
Organism
shk
Streptomyces huasconensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
ATG17_like
RNase_Y_N
DUF4795
Motif
Other DBs
NCBI-ProteinID:
UFQ18429
LinkDB
All DBs
Position
6020947..6026454
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AA seq
1835 aa
AA seq
DB search
MESGAATRGTETRAKDGQSLDKQRKPRNGATASVDAAALNRLLAALVAMRDGNFRKRLTV
SGDDVMSQIAAVFNEVADRNLHLTGELSRVRRMVGREGKLTERLESGASEGSWAAAIEAS
NALVDDLVRPVSEVGRVLSAVAEGDLEQRMELRAQSVDGNGHPLRGEFLKVGRTVNNLVD
QLSTFTDEVTRVASEVGTEGKLGGQAKVRGMSGSWKDLTDSVNTMAYRLTAQVRDIALVT
TAVAKGDLSRKVTVHVAGEMLELKNTVNTMVDQLSSFSSEVTRVAREVGTEGELGGQAQV
PGVAGVWKDLTDSVNLMAGNLTAQVRGIAEVTTAVANGDLSRKVTVSARGEVAQLAETIN
QMTETLRTFADEVTRVANEVGAEGQLGGQANVPGAAGTWKDLTDSVNTVFRNLTTQVRDI
AQVTTAVANGDLSQKVTVDVAGEMLELKNTVNTMVDQLSAFGSEVTRVAREIGVEGELGG
QAQVQGAAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLK
NTVNTMVDQLSSFADQVTRMARDVGTEGRLGGQARVDGVSGTWKDLTDSVNFMAGNLTSQ
VRQIAQVTTAVARGDLSQKIEVDARGEILELKNTINTMVDQLSAFADQVTRVAREVGTEG
RLGGQAQVPGVAGVWRDLTDSVNGMAGNLTAQVRNIAQVATAVARGDLSQKIDVDARGEI
LELKNTLNTMVDQLSAFAEQVTRVAREVGTDGILGGQAEVQGVSGTWKDLTQSVNGMANN
LTLQVRNIAEVTTAVAMGDLSKKITVDAKGEILELVTTVNTMVDQLSSFAEQVTRVAREV
GTEGQLGGQARVPGVTGIWKDLSDNVNLMANNLTSQVRNISQVSAAVANGDLTKKVTVEA
RGEVAQLADTVNTMVTTLSSFADEVTRVAREVGTDGILGGQARVPGVSGTWKDLTESVNS
MASNLTGQVRNIAMVTTAIAKGDLTKKIDIDARGEILELKTTINTMVDQLSSFAEQVTRV
AREVGTEGQLGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIAKVATAVTRGDLNLKI
EVDAAGEIQVLQDNINTMIANLRDTTLANKEQDWLKGNLARISGLMQGRRDLEDVASLIM
SELTPVVSAQHGAFFLAMPTDDATDLGGENEDAYELRMLGSYGYSMGSMPTSFRPGETLI
GTAAKERRTILVENAPSGYLRIASGLGEAPPAQVIVLPVLFEGTVLGVIELAAFQPFTQI
QKDFLSQIAEMIATSVNTISVNTKTEVLLKQSQELTEQLRERSAELESRQKALQDSNAEL
EEKAELLAQQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSL
LILAKLLADNADSNLTPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIAL
VQLVDYVEATFRPLTAEKGLDFSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDSGA
VELVIRHANNDVPNAIREQLLEAGSLRDPGADLIAFSVTDTGIGIAASKMRVIFEAFKQA
DGTTSRKYGGTGLGLSISREIARLLGGEIYAQSEPGRGSTFTLYLPLHPSELPPQGYAQL
APPRSTAELPAAESSPAAAEAPAQPDTAAVPQEPQTGPAALLRRRRRAAAAAAEQPPAQP
AQPVTGGQEQRPQEQWPTGPEASAARSGFHFEGEKVLIVDDDIRNVFALTSVLEQHGLSV
LYAENGREGIEVLEQHDDVTVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMK
GDREKAIDSGASDYVTKPVDPDHLLSVMEQWMRGQ
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcgacgcggggcactgagacgcgcgcgaaagacggacagtccctt
gacaaacagcgcaagccgcgcaatggggcgactgcttccgtggacgcggcggccttgaac
cggctgctcgcggccctggtggccatgcgggacggcaatttccgaaagcggctcaccgtc
tccggcgacgacgtcatgtcgcagatcgcggcggtcttcaatgaggtggccgaccggaat
ctgcacctcaccggtgagctgtcccgggtccggcgcatggtcggacgtgagggaaaactc
acggaacggctggagagcggagcgagcgagggctcctgggcggccgcgatcgaggcgtcg
aacgcccttgtcgacgatctcgtacgtcctgtctccgaggtcggccgggtcctctccgcg
gtggcggagggcgacctggagcagcgcatggaactgcgggcgcagtcggtggacggaaac
ggccatccgctgcgcggggagttcctgaaggtcggccggacggtcaacaacctcgtcgac
cagttgtccaccttcaccgacgaggtcacgcgggtggccagcgaggtcggcacggagggc
aagctgggcgggcaggccaaggtccgggggatgtccggttcgtggaaggacctcacggac
tccgtcaacaccatggcgtaccgcctgacggcgcaggtgcgcgacatcgcgctggtgacg
acggccgtggccaagggtgacctgtcccgcaaggtcacggtccatgtcgcgggcgagatg
ctggagctgaagaacaccgttaacacgatggtggaccagctctcctcgttctcctccgag
gtgacgcgcgtcgcccgggaggtcggcacggagggcgagctgggcggccaggcgcaggtg
ccgggtgtggccggcgtgtggaaggacctcaccgattcggtgaacctcatggccggcaac
ctcaccgcccaggtgcggggcatcgcggaggtgaccacggcggtcgccaacggcgacctg
tcgcggaaggtgacggtgagcgcgcgcggcgaggtcgcccagctcgccgagacgatcaac
cagatgaccgagacgttgcgtacgttcgcggacgaggtcacacgcgtggccaacgaggtc
ggtgccgaggggcagctgggtggtcaggccaatgtgccgggcgcggcggggacgtggaag
gacctgacggactcggtcaacacggtcttccgcaacctcaccacgcaggtgcgggacatc
gcgcaggtgacgacggcggtggcgaacggcgatctgtcgcagaaggtcaccgtcgatgtc
gcgggcgagatgctcgagttgaagaacaccgtgaacaccatggtggaccagctctccgcc
ttcggctccgaagtcacgcgcgtggcgcgggagatcggtgtcgagggtgagctgggcggt
caggcgcaggtgcagggcgcggccggtacgtggaaggacctcaccgactcggtgaacacc
gccttccgcaacctcaccggtcaggtgcgcaacatcgcgcaggtgacgacggcggtggcc
aacggcgacctgtcgcagaaggtcacggtggacgtctccggagagatgctccagctgaag
aacaccgtgaacacgatggtggaccagctgtcgtccttcgccgaccaggtcacgcggatg
gcgcgcgacgtgggcaccgagggccggctcggcggccaggcgcgcgtggacggcgtgagt
ggtacgtggaaggacctcaccgactccgtcaacttcatggcgggcaacctgacctctcag
gtacggcagatcgcgcaggtgaccacggcggtggcccgcggcgacctgtcccagaagatc
gaggtcgacgcgcgcggcgagatcctggagctgaagaacaccatcaacacgatggtcgac
cagctctccgccttcgccgaccaggtgacccgggtggcccgcgaggtgggcaccgagggg
cggctgggcggtcaggcgcaggtgccgggcgtggccggtgtgtggcgcgacctgacggac
tccgtgaacggcatggccgggaacctcaccgcgcaggtgcgcaacatcgcgcaggtcgcg
acggcggtggcccgcggtgacctgtcgcagaagatcgacgtggacgcgcgcggcgagatc
ctggagctgaagaacaccctcaacaccatggtggaccagctctccgccttcgcggagcag
gtcacgcgggtcgcccgcgaggtgggcaccgacggcatcctcggcggtcaggccgaggtg
cagggcgtctcggggacctggaaggacctgacgcagtccgtgaacggcatggcgaacaac
ctcaccctccaggtgcggaacatcgccgaggtcaccacggccgtcgccatgggtgacctc
tccaagaagatcaccgtggacgccaagggcgagatcctggaactcgtcacgaccgtcaac
accatggtcgaccagctctcgtcgttcgccgagcaggtcacgcgcgtggcccgcgaggtg
ggcaccgagggacagctcggcggccaggcgcgggtgccgggcgtcaccggcatctggaag
gacctgagcgacaacgtcaacctgatggccaacaacctgaccagccaggtgcggaacatc
tcccaggtgtcggcggcggttgccaacggcgacctcaccaagaaggtcacggtcgaggcg
cgcggcgaggtcgcccagctcgccgacacggtcaacacgatggtgacgacgctcagctcg
ttcgccgacgaggtcacgcgcgtggcccgtgaggtgggcacggacggcatcctcggcggc
caggcgcgcgtgccgggtgtctccggtacgtggaaggacctcaccgagtccgtgaactcg
atggcgtccaacctgaccggccaggtccgcaacatcgcgatggtgaccaccgcgatcgcc
aagggtgatctcaccaagaagatcgacatcgacgcccggggcgagatcctggagctgaag
acgaccatcaacacgatggtggaccagctgtcgtccttcgccgagcaggtcacccgggtc
gcccgcgaggtgggcacggagggccagctgggcggccaggcgcgcgtgcgggacgtcgac
ggcacctggcgcgacctcaccgagtccgtgaacgagatggccgggaacctcacccggcag
gtgcgggccatcgccaaggtcgccaccgcggtgacccggggcgatctcaacctgaagatc
gaggtcgacgcggcgggcgagatccaggtcctccaggacaacatcaacacgatgatcgcc
aacctccgcgacaccaccctggccaacaaggagcaggactggctcaagggcaacctcgcg
cggatctcgggcctgatgcagggccgccgggacttggaggacgtcgcctcgctgatcatg
agcgagctgacgccggtggtctccgcgcagcacggcgcgttcttcctggcgatgcccacg
gatgacgccacggacctcggcggcgagaacgaggacgcgtacgagctgcgcatgctcggc
agttacggctactccatgggctccatgccgacgtccttccggcccggtgagacgctgatc
ggcacggccgccaaggagcgccgcacgatcctcgtggagaacgcgccctcgggctatctg
cggatcgcctccggcctcggtgaggcgccgcccgcgcaggtcatcgtgttgccggtgctc
ttcgaagggaccgtcctcggggtgatcgagctggccgcgttccagcccttcacgcagatc
cagaaggacttcctcagccagatcgccgagatgatcgcgacgagcgtcaacaccatcagc
gtcaatacgaagaccgaggtgctgctcaagcagtcgcaggagctgaccgagcaactgcgt
gagcggtctgcggagttggagagccggcagaaggcgttgcaggactcgaacgccgagttg
gaggagaaggccgagctgctggcccagcagaaccgcgacatcgaggtcaagaacaccgag
atcgaagaggccaggcaggtcctggaggagcgtgcggagcagctcgcggtctcgatgcgc
tacaagtccgagttcctggcgaacatgtcgcacgagctgcgtacgccgctcaactccctg
ctgatcctcgccaagttgctcgcggacaacgccgactcgaacctcaccccgaagcaggtg
gagttcgccgagacgatccacggcgcgggctcggacctgctccagctgatcaacgacatc
ctcgacctgtcgaaggtggaggccggcaagatggacgtctccccgacgcgcatcgccctg
gtccaactcgtcgactacgtagaggccactttccgcccgctgaccgccgagaaggggctc
gacttctccgtacgtgtctccccggagctgcccgcgaccctgcacacggacgagcagcgc
ctgctccaggtgctgcgcaacctcctgtccaacgcggtgaagttcaccgactccggagcg
gtcgagctggtgatccggcacgccaacaacgacgtgcccaacgccatccgcgagcagctc
ctggaggcgggctcgctgcgggacccgggcgccgacctgatcgccttctcggtcaccgac
accggcatcggcatcgcggccagcaagatgcgggtcatcttcgaggcgttcaagcaggcc
gacggtacgaccagccggaagtacggcggcacgggcctcggcctgtcgatcagccgggag
atcgcgcggctgctcggcggcgagatctacgcccagagcgagccgggccgcggctcgacg
ttcacgctctatttgccgctgcacccgagcgaactgcctccccagggctacgcgcagctc
gcgcccccgcgctccacggcggaactgcccgcggcggaaagctccccggcggccgccgag
gctcccgcgcagccggacaccgccgcggtgccgcaggagccgcagacgggcccggcggcc
cttctgcgccgccgtcggcgcgcggcggcagcggcggcggagcagccgcccgcgcagccg
gcccagccggtgaccggcggccaggagcagcggccgcaggagcagtggcccaccgggccg
gaggcgtcggccgcgcggtcgggcttccacttcgagggggagaaggtgctgatcgtcgac
gacgacatccgcaacgtcttcgcgctcaccagcgtcctggagcagcacggcctgtcggtg
ctgtacgcggagaacggccgcgagggcatcgaagtcctggagcagcacgacgacgtgacg
gtcgttctgatggacatcatgatgccggagatggacgggtacgccacgacgacggcgatc
cgcaggatgccgcagttcgccgggctgccgatcatcgcgctcacggcgaaggcgatgaag
ggtgaccgggagaaggcgatcgactccggagcttccgactacgtcacgaagccggtcgat
cccgatcacctgttgtcggtgatggagcagtggatgcgcgggcaatga
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