Streptomyces huasconensis: J2N69_27815
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Entry
J2N69_27815 CDS
T07920
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
shk
Streptomyces huasconensis
Pathway
shk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
shk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J2N69_27815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shk03021
]
J2N69_27815
Transcription machinery [BR:
shk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J2N69_27815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Motif
Other DBs
NCBI-ProteinID:
UFQ20382
LinkDB
All DBs
Position
6115256..6116587
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AA seq
443 aa
AA seq
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MVSAAEPKRPRKSVAAKSPVKRTATRTVAAKTATVKPTATAATEAATADGTAEDAPAKKV
AAKKTTAKKAVAKKTVAKKATAKKSASKKDADELLDEEATEEAPAAGKPGEGEPAEEGAQ
GFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVELAKRIEAGLFAED
KLANADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGN
LGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQ
MLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAV
VPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQ
IESKTMSKLRHPSRSQVLRDYLD
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggtcagtgccgcggagccgaaacgcccccgcaagagcgtcgcagcgaagagcccggtc
aagcgcaccgcgaccaggacggtcgcggccaagaccgccacggtgaagcccaccgccacc
gccgccactgaggcggcgaccgcggatggcaccgccgaggacgcgcccgcgaagaaggtc
gcagccaagaagacgacggccaagaaggctgtcgccaagaagaccgtcgccaagaaggcc
acggccaagaagtccgcttccaagaaggacgccgacgaactcctggatgaagaggccacc
gaggaggcacccgccgccggcaagcccggcgagggcgagcccgccgaggaaggcgcccag
ggcttcgtgctctccgacgaggacgaggacgacgcgcccgcccagcaggtcgcagcggcc
ggagccaccgccgaccccgtcaaggactacctgaagcagatcggcaaggtccccctcctc
aacgccgagcaggaggtcgaactcgccaagcgcatcgaagccggcctgttcgccgaggac
aagctggccaacgccgacaagctcgcgccgaagctcaagcgtgagctggagatcatcgcc
gaggacggccggcgcgccaagaaccacctcctggaggccaacctccgcctggtggtctcc
ctggccaagcgctacaccggccgcggcatgctcttcctggacctcatccaggagggcaac
ctcggtctgatccgcgcggtcgagaagttcgactacaccaagggctacaagttctccacg
tatgccacctggtggattcggcaggcgatcacccgcgccatggccgaccaggcccgcacc
atccgcatcccggtgcacatggtcgaggtcatcaacaagctggcccgtgtccagcggcag
atgctccaggacctgggccgcgagcccactccggaggagctggccaaggaactcgacatg
accccggagaaggtcatcgaggtccagaagtacggccgtgagccgatctccctccacacc
cctctgggtgaggacggcgacagcgagttcggtgacctcatcgaggactccgaggcggtc
gtgccggccgacgcggtcagcttcacgctgctccaggagcagctgcactcggtcctggac
accctgtcggagcgtgaggccggcgtggtctccatgcgcttcggtctcacggacggccag
cccaagaccctcgacgagatcggcaaggtctacggagtgacgcgtgagcgcatccgtcag
atcgagtcgaagacgatgtcgaagctgcgtcacccgtcgcgctcgcaggttctgcgcgac
tacctcgactag
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