Streptomyces huasconensis: J2N69_27830
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Entry
J2N69_27830 CDS
T07920
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
shk
Streptomyces huasconensis
Brite
KEGG Orthology (KO) [BR:
shk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shk03032
]
J2N69_27830
03400 DNA repair and recombination proteins [BR:
shk03400
]
J2N69_27830
Enzymes [BR:
shk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J2N69_27830
DNA replication proteins [BR:
shk03032
]
Prokaryotic type
DNA Topoisomerases
J2N69_27830
DNA repair and recombination proteins [BR:
shk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J2N69_27830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UFQ18492
LinkDB
All DBs
Position
6118399..6120522
Genome browser
AA seq
707 aa
AA seq
DB search
MTAETSVPSTALLTGADRDGSNYTARHLLVLEGLEAVRKRPGMYIGSTDSRGLMHCLWEI
IDNSVDEALGGYCDRIEVILHDDASVEVRDNGRGIPVDVEPKTGLSGVEVVMTKLHAGGK
FGGGSYAASGGLHGVGASVVNALSARLDVEVDRAGHTHAISFRRGVPGAFAKMGPEAPFD
PSAKLTKVKKIPKTRTGTRVRYWADRQIFLKDAKLSLENLHQRARQTAFLVPGLTIVVRD
EFGLGEGGTKGEESFRFDGGISEFCEYLAQDKAVCDVLRFSGQGTFKETVPVLDDHGQMT
PTEVTRELGVDVALRWGTGYDTTVRSFVNIIATPKGGTHVTGFERSLTKTMNEVMRTQKV
LRVAEDDIVKDDALEGLTAVVTVRLAEPQFEGQTKEVLGTSAANRIVANVIAKELKAFLT
STKRDAKAQARAVMDKAVAAARTRIAARQHKDAQRRKTALESSSLPAKLADCRSDDVERS
ELFIVEGDSALGTAKLARNSEFQALLPIRGKILNVQKASVTDMLKNAECGAIIQVIGAGS
GRTFDIDAARYGKIILLVDADVDGAHIRILLLTLFQRYMRPMVEAGRVFAAVPPLHRIEL
SQPKKGQDKYVYTYSDRELRETLLEMQRKNVRYKDSIQRYKGLGEMDADQLAETTMDPRF
RTLRRINISDLDSAEQVFDLLMGNDVAPRKEFITSSAATLDRSRIDA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgagacgtccgtgccgtccacagcgttgctgaccggagcagaccgggacggt
tccaactacaccgcgcggcacctgctcgtcctggaggggctcgaggccgtccgtaagcgc
ccgggcatgtacatcgggtcgacggacagccgcggcctgatgcactgcctctgggagatc
atcgacaactccgtcgacgaggccctgggcgggtactgcgaccgcatcgaggtcatcctc
cacgacgacgcctccgtggaggtccgggacaacggccggggcatccccgtagatgtcgag
cccaagaccggcctttccggagtcgaggtcgtcatgaccaagctccacgccggcggcaag
ttcggcggtggctcctacgccgcctccggcggtctgcacggcgtgggcgcctccgtggtg
aacgcgctctccgcgcgcctcgacgtcgaggtggaccgagccgggcacacacacgccatc
agtttccggcgcggtgtccccggtgctttcgccaagatgggacccgaggcgcccttcgac
ccgtcggcgaagctcaccaaggtcaagaagatccccaagacgcgcaccggtacgcgcgtg
cgttactgggcggatcggcagatcttcctgaaggacgccaagctgtcgctggagaacctg
caccagcgcgcccggcagaccgccttccttgtgccgggcctgaccatcgtcgtgcgcgac
gaattcggcctcggcgagggtggcacgaagggcgaggaatccttccgcttcgacggcggc
atcagcgagttctgcgagtacctggcccaggacaaggccgtctgtgacgtcctccgcttc
tccggacagggcaccttcaaggagacggtgccggtcctcgacgaccacggccagatgacc
cccacggaggtcacccgtgagctcggcgtggacgtggcactgcgatggggcaccgggtac
gacacgaccgtccggtccttcgtcaacatcatcgccacccccaagggcggcactcacgtg
acgggcttcgagcgctccctcaccaagacgatgaacgaggtgatgcgcacccagaaggtg
ctgcgcgtcgctgaggacgacatcgtcaaggatgacgcccttgaaggcctcacggctgtc
gtcacggtgcgtctcgccgagccgcagttcgagggccagaccaaggaggtgctgggcacc
tccgcggccaaccgcatcgtcgccaacgtcatcgccaaggagctcaaagcgttcctgacg
tcgaccaagcgggacgcgaaggcgcaggcccgcgccgtcatggacaaggccgtcgccgcc
gcccggacgcgcatcgcggcccgccagcacaaggacgcccagcgccggaagaccgcgctg
gagtcctcgtcgctgcccgccaagctcgcggactgccgcagtgacgacgtggagcgcagc
gagctcttcatcgtcgagggcgactccgcgctcggtacggccaagctcgcgcggaactcc
gagttccaggcactgctgccgatccgcggcaagatcctcaacgttcagaaggcgtccgtg
acggacatgctgaagaatgccgagtgcggcgcgatcatccaggtcataggagccgggtcc
ggccggaccttcgacatcgacgcggcgcggtacggcaagatcattctgctcgtcgacgcc
gacgtcgacggcgcgcacatccgaatcctgctgctgacgctgttccagcggtacatgcgg
cccatggtcgaggcagggcgggtgttcgcggcggtgccgccactgcaccgcatcgagctc
agccagcccaagaagggccaggacaagtacgtctacacgtactcggaccgtgaactgcgc
gagacgctgctcgagatgcagcgcaagaacgtgcggtacaaggactcgatccagcggtac
aagggcctcggtgagatggatgccgaccagctggccgagaccacgatggacccgcgcttc
cggacgctgcggcggatcaacatctccgacctggactcggctgagcaggtcttcgatctg
ttgatgggcaacgacgtcgcgccgcgcaaggaattcatcaccagctcggcggcgacgctg
gaccgctcgcgcatcgacgcgtag
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