Streptomyces huasconensis: J2N69_31230
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Entry
J2N69_31230 CDS
T07920
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
shk
Streptomyces huasconensis
Pathway
shk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J2N69_31230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shk03000
]
J2N69_31230
03400 DNA repair and recombination proteins [BR:
shk03400
]
J2N69_31230
Enzymes [BR:
shk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
J2N69_31230
Transcription factors [BR:
shk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
J2N69_31230
DNA repair and recombination proteins [BR:
shk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J2N69_31230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
UFQ20434
LinkDB
All DBs
Position
6984345..6985832
Genome browser
AA seq
495 aa
AA seq
DB search
MHTDTERCVRAVQSKDARFDGWFFTAVVTTRIYCRPSCPVVPPKAENMTFYPSAAACQQA
GFRACKRCRPDSTPGSPEWNQRADLVARAMRLIGDGVVDREGVPGLATRLGYSARQVERQ
LLAELGAGPLALARAQRAQTARLLIETTALPMAEIAFAAGFSSIRTFNDTVREVFALAPG
ELRARAPKQAAGEPTATSGALSLRLPFRAPLNPDNLFGHLIATGVPGVEEWRDGAYRRTL
SLPYGHGVVALTPHPTHIGCRLSLTDLRDLTIAISRCRRMLDLDADPAAVDGRLRDDPLL
APLVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGTPIEDPEPEGGL
THLFPSPAALAALDPEALALPRSRRTTLTTLVRHLADGSLRLGAESGWDEARARLAELPG
FGPWTVEIIAMRALGDPDAFLPSDLGIRRTARRLGLPHTPAALTARAAAWRPWRAYAVQY
LWATDDHPINHLPAA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgagcgctgtgtacgtgccgttcagtcgaaggacgcccgcttcgac
ggctggttcttcacggccgtcgtcaccacccgcatctactgccgtcccagctgtccggtc
gtgccgcccaaggccgagaacatgaccttctacccgagcgccgccgcctgccagcaggcc
ggcttccgggcctgcaagcggtgccgcccggacagcacaccgggctcgcccgagtggaac
cagcgggccgacctggtcgcccgcgccatgcgtctcatcggcgacggcgtcgtggaccgc
gaaggcgtccccggcctcgccacccgcctcggctacagcgcccgtcaggtggagcgccag
ctcctcgccgagctgggcgcgggaccactggcgctcgcccgcgcccagcgggcccagacc
gcgcggctgctcatcgagacgaccgccctgcccatggcggagatcgccttcgccgcgggg
ttctcctcgatccgcaccttcaacgacaccgtccgtgaggtcttcgcgctcgcccccggg
gagctgcgcgcccgcgcacccaagcaggccgcgggggagcccaccgcgacgtccggggcc
ctctccctgcggctgccgttccgcgccccgctcaaccccgacaacctcttcggccacctc
atcgcgaccggcgtcccgggtgtcgaggagtggcgcgacggcgcgtaccgcaggaccctg
agcctgccctacggccacggcgtcgtcgccctcaccccgcaccccacccacatcggctgc
cggctgagcctcaccgacctgcgcgacctgaccatcgccatcagccgctgccgccgcatg
ctcgacctggacgccgacccggccgccgtggacgggcggctgcgtgacgacccgctgctc
gcgccgctcgtcgacaaggccccggggcggcgggtgccccgtaccgtcgacgaggccgag
ttcgccgtgcgcgccgtcctcggccagcaggtctccacggccgccgcccgcacccacgcc
gcgcgcctcgtcaccgcgcacggcacccccatcgaggacccggagcccgaggggggcctc
acccacctcttcccgagcccggcggccctcgccgcgctcgaccccgaggcgctcgccctg
ccccgcagccgccgcaccaccctgaccacgctcgtacgccacctcgccgacggcagcctc
cggctcggcgcggagagcggctgggacgaggcccgcgcccggctcgccgaactccccggc
ttcggcccctggacggtcgagatcatcgccatgcgcgcgctcggcgaccccgacgccttc
ctcccctccgacctcggcatccggcgcaccgcccggcggctgggcctgccgcacaccccc
gccgcgctcaccgcgcgcgccgccgcctggcggccctggcgggcgtacgccgtgcagtac
ctgtgggccaccgacgaccacccgatcaaccacctccccgccgcgtaa
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