Shewanella halifaxensis: Shal_0016
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Entry
Shal_0016 CDS
T00654
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
shl
Shewanella halifaxensis
Pathway
shl00071
Fatty acid degradation
shl00280
Valine, leucine and isoleucine degradation
shl00310
Lysine degradation
shl00362
Benzoate degradation
shl00380
Tryptophan metabolism
shl00410
beta-Alanine metabolism
shl00640
Propanoate metabolism
shl00650
Butanoate metabolism
shl00907
Pinene, camphor and geraniol degradation
shl00930
Caprolactam degradation
shl01100
Metabolic pathways
shl01110
Biosynthesis of secondary metabolites
shl01120
Microbial metabolism in diverse environments
shl01200
Carbon metabolism
shl01212
Fatty acid metabolism
Module
shl_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Shal_0016
00650 Butanoate metabolism
Shal_0016
09103 Lipid metabolism
00071 Fatty acid degradation
Shal_0016
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Shal_0016
00310 Lysine degradation
Shal_0016
00380 Tryptophan metabolism
Shal_0016
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Shal_0016
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Shal_0016
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Shal_0016
00930 Caprolactam degradation
Shal_0016
Enzymes [BR:
shl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Shal_0016
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Shal_0016
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Shal_0016
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Shal_0016
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABZ74592
UniProt:
B0TLB9
LinkDB
All DBs
Position
complement(18833..20986)
Genome browser
AA seq
717 aa
AA seq
DB search
MIYQSPTIEVELLEDNIAHLCFKAQGSVNKFDRETIDSLNAALDSIKQDTSIKALMLSSA
KDAFIVGADITEFLGLFAEEDAVLQSWLEQANVVFNKLEDLPFPTLSAINGFALGAGCET
ILATDFRIADTTARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITSGKDQRPDAALK
VGAIDAVVAPEQLRPAALRMLKDAMAEKLDWQTRRAKKLAPLTLPKLEAMMSFATAKGMV
FKIAGKHYPAPMAVISVIEQAAQCGRAEALQIEHQAFIKLAKTEVAQALIGIFLNDQLVK
GKAKKAGKLAKKVNSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEAAKLL
TAQVKRGRSTPAKMATVLNNITPALDYAPVKDTDIIVEAVVEHPKVKSMVLAEVEEHVSE
DAIITSNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEVIRGENSSDETVASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKSGKDAIDVMFEAERFGQKNNKGFYQYSVDHRGKP
KKDLDPTSYELLQAEFGEQKAFESDEIIARTMIPMIIETVRCLEEGIIASPAEADMGLVY
GLGFPPFRGGVFRYLDTIGVANFVALADKYAHLGGLYQVTDTMRELAANNGSYYQQA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagccctacaattgaggttgagttactcgaagacaacatcgcgcatttg
tgcttcaaggcacaaggttcggttaataagttcgacagggaaaccatcgactcgttaaat
gctgcactcgacagcatcaaacaagacactagcatcaaggctctaatgctaagttcagcg
aaagacgctttcatcgttggtgccgatatcacagaattcctaggattgttcgccgaagag
gatgcagtcttacagtcttggctagagcaagccaacgttgtattcaacaaattagaagat
ctgcccttcccaactctttctgcaattaatggctttgcgctgggtgccggttgcgaaacc
attctagctaccgacttccgtatagcagacaccacagcccgtattggcctaccagaaact
aagctaggtattatcccgggctttggtggtaccgtgcgcctacctcgtgtaattggtgcc
gacaacgcacttgagtggatcacatcaggcaaagaccagcgtccagacgccgcacttaaa
gttggtgccatcgatgcagttgttgctccagagcaacttagacccgcggcattaagaatg
ctcaaagacgccatggcagaaaaacttgattggcagacccgccgcgctaagaagctggca
ccgcttacgctaccaaaactcgaagccatgatgtctttcgcaaccgcaaaaggtatggtc
tttaagattgcaggtaaacactacccagcaccaatggctgtgattagcgttatcgagcaa
gccgcgcagtgcggccgcgctgaagcactacaaatagaacatcaagcatttataaagctt
gccaagacagaagtcgcacaggcactgattggtatcttccttaatgaccagctcgtaaaa
ggcaaagccaagaaagcaggcaagctggctaagaaggtaaactcggcagcggtactcggc
gccggcatcatgggcggcggtatcgcatatcaaagtgccagcaagggcacgccgattgtg
atgaaagatattgcccaacccgcactcgatttaggtttaggtgaagccgctaagctatta
actgcacaagttaaacgcggacgctcaacaccagccaagatggctacggtgctgaataac
atcactccagcactcgattacgctccagtaaaagatactgatatcatcgttgaagcggtt
gtcgagcatccaaaagtaaaatctatggtgctggcagaggttgaagagcatgtcagtgaa
gatgccattatcacttcaaacacatcgactatatcaattaacctactagccaagagcctt
aaaaagcctgagcgcttctgtggtatgcacttcttcaacccggtacacaagatgccgcta
gtcgaagtcattcgtggtgaaaacagctctgacgaaacggttgcctcagtagtggcttac
gccagcaaaatgggcaagacgcctatagtggttaatgactgcccaggcttctttgtaaac
cgagtactcttcccgtactttgccggctttagtggcctacttgccgatggtgctgatttt
gccgctatcgataaagtgatggagaagcaatttggttggccaatgggccctgcttacctt
cttgatgttgtaggcctagatactggtcatcatgcacaagcagttatggctgaaggcttc
cctgaccgcatgggtaagtcaggtaaagatgctatcgatgttatgttcgaagccgagcgc
ttcggccagaaaaacaataaaggtttctatcagtattcggttgaccatcgcggcaagcca
aagaaagatttagatccaaccagctatgaattactgcaagctgagtttggtgagcaaaaa
gcatttgaatcagatgagatcatcgctcgcactatgatccctatgattatcgagacagtt
cgctgccttgaagaaggaattatcgcttcgcctgctgaagcggatatgggcttagtttac
ggccttggcttcccaccatttagaggcggtgtattccgttacctagataccataggtgtc
gctaactttgttgcactagcagacaaatacgcacacttaggtggtctataccaagtaacc
gacactatgcgtgaacttgccgccaacaatggcagctactaccagcaggcttaa
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