Shewanella halifaxensis: Shal_0031
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Entry
Shal_0031 CDS
T00654
Name
(GenBank) Microbial collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
shl
Shewanella halifaxensis
Brite
KEGG Orthology (KO) [BR:
shl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shl01002
]
Shal_0031
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
shl02042
]
Shal_0031
Enzymes [BR:
shl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
Shal_0031
Peptidases and inhibitors [BR:
shl01002
]
Metallo peptidases
Family M9
Shal_0031
Bacterial toxins [BR:
shl02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
Shal_0031
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Membrane_bind
Motif
Other DBs
NCBI-ProteinID:
ABZ74607
UniProt:
B0TLD4
LinkDB
All DBs
Position
complement(35594..37366)
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AA seq
590 aa
AA seq
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MNTPSKFAITIIASLLASLSGCASVKQQNANPQLVNQINAASETALFDAQSPLLTTDAFT
QASFALASSKDIAVIDKLLYYFRAFSYYGPVDDLSDADIAALAEALEEISDSGLLDVQVR
LQEQYAVTLYRYFANNDAAPALAPLLPQLEVQLKQLAASTPNKANDYALLETLKAYGFLL
NKSRKEVDGELNKVLLATDLNSALIDFAASAESIRANNDWPRTNAYWALALYRLALPSSE
DGEDTEQELALDAAVAAIAKADVTLRGDAAKDAYTAGFHVNVFAGQELCEENSDICRIPE
LKTALPIEHHCSDSLFILTQDLNEQELAESCKKLTSQESNFHSVLKTQLKPAPNDFNTAL
RVVAFKNWSQYHLNGQLIFDINTDNGGMYIEGTPSKPGNQATFFAYRQWWIEPEFKVWNL
NHEYVHYLDGHFVKYAGFGHFPEKMVWWSEGLAEYISKGDDNPSALRVIKRDIGEAPTLE
EIFATEYKDGQDRTYKWSYMAIRFLVENYHSEFVQLSHYLKTDYFEGYDQLMASLTQHQA
QFSTWLDTQVGEFDDNEEKTKPRLHKQGRYDYRDYLQPQHLAHGENHLKF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaccctctaagttcgctattactattatagcgagtctgctagcctctctctct
ggctgcgccagtgttaagcagcaaaacgccaacccacaactcgttaatcagattaacgcc
gcatcagaaacagcactgtttgatgcccaaagcccactattaacgactgatgcgtttact
caagccagctttgcgcttgcgagcagcaaagacattgcggtgattgataaactgctttac
tactttcgagccttcagttactacgggccagtagatgacttaagtgatgctgatattgca
gctttagctgaagcacttgaagagatcagtgattctggacttctcgatgttcaagtccgc
ttacaagagcaatatgccgtcaccctataccgttattttgctaataacgacgcagcccct
gccttagctccgttactgcctcagttagaggtacaactaaagcaattggcagcatcaaca
cccaataaagccaatgattatgcactactagaaaccttaaaggcctatggattcttactt
aacaagagccgcaaagaggtcgatggtgaactaaacaaagtattgttagctacagactta
aacagcgcccttattgattttgcagcaagcgcagaaagtattcgcgcaaacaacgactgg
ccacgcactaatgcctactgggcattagccctttatcgtttagcactaccatcatcagaa
gatggcgaagacacagagcaagagctagccctcgacgccgctgttgcggcgattgctaaa
gccgatgtaacacttcgtggtgatgccgctaaagatgcttatactgcaggctttcacgtc
aacgtatttgctggccaagaactgtgtgaggaaaatagcgatatatgccgtattccagaa
cttaaaaccgcgctccccattgaacatcactgctctgacagcttatttatactgactcaa
gatctcaacgagcaagagcttgccgagagctgtaaaaagctaacatcacaagagtctaac
ttccacagtgtgctaaaaacccagcttaagcctgcaccaaatgactttaataccgccctt
agggtcgtcgcgtttaagaactggagccagtaccaccttaatggccagctcatcttcgat
atcaataccgataatggcggtatgtatattgaaggcacgccttcaaaacccggcaaccaa
gcgaccttctttgcttaccgccaatggtggattgagccagaattcaaagtctggaatttg
aaccatgaatatgtgcactacctagatggtcactttgtaaaatacgctggctttggacac
tttcctgagaaaatggtctggtggtcagaaggtttagccgaatacatctctaaaggtgat
gacaacccttctgctcttcgtgttattaagcgtgacatcggagaagctcctacattagaa
gagatctttgccaccgaatataaagatggccaagatagaacctataaatggagctacatg
gcgattcgttttctggttgaaaactaccatagcgagtttgttcagctgagccactacttg
aaaacggactactttgaaggctatgaccagttgatggcctcccttactcagcatcaagca
cagttttcaacttggctagacactcaagttggcgagtttgatgataacgaagagaaaact
aagccaagactgcacaagcagggtcgttatgactaccgagactatttgcagccacagcat
ttagctcatggcgagaaccacctgaagttctag
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